RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 PANK3Q9H999 370 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 PDZRN3Q9UPQ7 1066 aa10.75□□□□□ -0.69
HMGCR-206ENST00000508070 H0YIN7 160 aa10.74□□□□□ -0.69
HMGCR-206ENST00000508070 RASSF7Q02833 373 aa10.74□□□□□ -0.69
HMGCR-206ENST00000508070 SLC52A2Q9HAB3 445 aa10.74□□□□□ -0.69
HMGCR-206ENST00000508070 HSPA1AP0DMV8 641 aaKnown RBP10.73□□□□□ -0.69
HMGCR-206ENST00000508070 HSPA1BP0DMV9 641 aaKnown RBP10.73□□□□□ -0.69
HMGCR-206ENST00000508070 IL13P35225 146 aa10.73□□□□□ -0.69
HMGCR-206ENST00000508070 C2CD5Q86YS7 1000 aa10.73□□□□□ -0.69
HMGCR-206ENST00000508070 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
HMGCR-206ENST00000508070 LGR6Q9HBX8 967 aa10.73□□□□□ -0.69
HMGCR-206ENST00000508070 SBF1O95248 1867 aa10.72□□□□□ -0.69
HMGCR-206ENST00000508070 A0A087WZG4 1122 aa10.72□□□□□ -0.69
HMGCR-206ENST00000508070 RNMTO43148 476 aaKnown RBP10.72□□□□□ -0.69
HMGCR-206ENST00000508070 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
HMGCR-206ENST00000508070 TNRC6CQ9HCJ0 1690 aaKnown RBP10.72□□□□□ -0.69
HMGCR-206ENST00000508070 POTECB2RU33 542 aa10.71□□□□□ -0.69
HMGCR-206ENST00000508070 NFKBIEO00221 500 aa10.71□□□□□ -0.69
HMGCR-206ENST00000508070 STARD3NLO95772 234 aa10.71□□□□□ -0.69
HMGCR-206ENST00000508070 SLC39A6Q13433 755 aa10.71□□□□□ -0.69
HMGCR-206ENST00000508070 COL15A1P39059 1388 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 PDE6BP35913 854 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 EIF5P55010 431 aaKnown RBP10.7□□□□□ -0.7
HMGCR-206ENST00000508070 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGCR-206ENST00000508070 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-206ENST00000508070 ZBTB1Q9Y2K1 713 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
HMGCR-206ENST00000508070 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
HMGCR-206ENST00000508070 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
HMGCR-206ENST00000508070 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGCR-206ENST00000508070 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
HMGCR-206ENST00000508070 TJP1Q07157 1748 aa10.69□□□□□ -0.7
HMGCR-206ENST00000508070 C21orf2O43822 256 aa10.68□□□□□ -0.7
HMGCR-206ENST00000508070 BICDL1Q6ZP65 573 aa10.68□□□□□ -0.7
HMGCR-206ENST00000508070 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
HMGCR-206ENST00000508070 ADAMTS7Q9UKP4 1686 aa10.68□□□□□ -0.7
HMGCR-206ENST00000508070 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
HMGCR-206ENST00000508070 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
HMGCR-206ENST00000508070 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
HMGCR-206ENST00000508070 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
HMGCR-206ENST00000508070 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
HMGCR-206ENST00000508070 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 HMOX1P09601 288 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 HSPA5P11021 654 aaKnown RBP10.66□□□□□ -0.7
HMGCR-206ENST00000508070 IL6STP40189 918 aaPredicted RBP10.66□□□□□ -0.7
HMGCR-206ENST00000508070 TBC1D9BQ66K14 1250 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 PRR5LQ6MZQ0 368 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
HMGCR-206ENST00000508070 TAOK3Q9H2K8 898 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 SCN11AQ9UI33 1791 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 NRXN2Q9P2S2 1712 aa10.66□□□□□ -0.7
HMGCR-206ENST00000508070 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
HMGCR-206ENST00000508070 DDNO94850 711 aaPredicted RBP10.65□□□□□ -0.7
HMGCR-206ENST00000508070 STYK1Q6J9G0 422 aa10.65□□□□□ -0.7
HMGCR-206ENST00000508070 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
HMGCR-206ENST00000508070 ZNF219Q9P2Y4 722 aaPredicted RBP10.65□□□□□ -0.7
HMGCR-206ENST00000508070 MKRN1Q9UHC7 482 aaKnown RBP10.65□□□□□ -0.7
HMGCR-206ENST00000508070 TBC1D2BQ9UPU7 963 aa10.65□□□□□ -0.7
HMGCR-206ENST00000508070 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.71
HMGCR-206ENST00000508070 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.71
HMGCR-206ENST00000508070 MRC1P22897 1456 aa10.64□□□□□ -0.71
HMGCR-206ENST00000508070 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
HMGCR-206ENST00000508070 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-206ENST00000508070 ZNF496Q96IT1 587 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-206ENST00000508070 NPHP1O15259 732 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 SRGNP10124 158 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-206ENST00000508070 ST5P78524 1137 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 TEFQ10587 303 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 ZNF790Q6PG37 636 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 LDHDQ86WU2 507 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
HMGCR-206ENST00000508070 HEG1Q9ULI3 1381 aa10.63□□□□□ -0.71
HMGCR-206ENST00000508070 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 CCDC88AQ3V6T2 1871 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 FOXN1O15353 648 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
HMGCR-206ENST00000508070 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 IL17REQ8NFR9 667 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 AIDAQ96BJ3 306 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 FMNL2Q96PY5 1086 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
HMGCR-206ENST00000508070 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
HMGCR-206ENST00000508070 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
HMGCR-206ENST00000508070 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
HMGCR-206ENST00000508070 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-206ENST00000508070 A1BGP04217 495 aa10.61□□□□□ -0.71
HMGCR-206ENST00000508070 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms