RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
PTPN13-207ENST00000508063 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
PTPN13-207ENST00000508063 STARD3NLO95772 234 aa14.81□□□□□ -0.04
PTPN13-207ENST00000508063 U2AF1L5P0DN76 240 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-207ENST00000508063 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
PTPN13-207ENST00000508063 U2AF1Q01081 240 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPN13-207ENST00000508063 TEX13AQ9BXU3 409 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-207ENST00000508063 RSPH6AQ9H0K4 717 aa14.81□□□□□ -0.04
PTPN13-207ENST00000508063 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-207ENST00000508063 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
PTPN13-207ENST00000508063 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
PTPN13-207ENST00000508063 ABCB7O75027 752 aa14.8□□□□□ -0.04
PTPN13-207ENST00000508063 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
PTPN13-207ENST00000508063 FKBP8Q14318 412 aa14.8□□□□□ -0.04
PTPN13-207ENST00000508063 IL17REQ8NFR9 667 aa14.8□□□□□ -0.04
PTPN13-207ENST00000508063 SRP68Q9UHB9 627 aaKnown RBP14.8□□□□□ -0.04
PTPN13-207ENST00000508063 FCHSD2O94868 740 aa14.79□□□□□ -0.04
PTPN13-207ENST00000508063 ZNF790Q6PG37 636 aa14.79□□□□□ -0.04
PTPN13-207ENST00000508063 RTF1Q92541 710 aaKnown RBP14.79□□□□□ -0.04
PTPN13-207ENST00000508063 WWC3Q9ULE0 1092 aa14.79□□□□□ -0.04
PTPN13-207ENST00000508063 COL15A1P39059 1388 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 CEMIPQ8WUJ3 1361 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 NEFMP07197 916 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 USPL1Q5W0Q7 1092 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 PHACTR3Q96KR7 559 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 NARFQ9UHQ1 456 aa14.78□□□□□ -0.04
PTPN13-207ENST00000508063 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
PTPN13-207ENST00000508063 N4BP2Q86UW6 1770 aaPredicted RBP14.78□□□□□ -0.04
PTPN13-207ENST00000508063 HEG1Q9ULI3 1381 aa14.77□□□□□ -0.04
PTPN13-207ENST00000508063 A0A087WZG4 1122 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 TM4SF1P30408 202 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 C1QTNF8P60827 252 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 BCS1LQ9Y276 419 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 ZBTB1Q9Y2K1 713 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 KIAA1551Q9HCM1 1747 aa14.77□□□□□ -0.05
PTPN13-207ENST00000508063 ATP10DQ9P241 1426 aa14.76□□□□□ -0.05
PTPN13-207ENST00000508063 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
PTPN13-207ENST00000508063 DPEP1P16444 411 aa14.76□□□□□ -0.05
PTPN13-207ENST00000508063 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
PTPN13-207ENST00000508063 DDR1Q08345 913 aa14.76□□□□□ -0.05
PTPN13-207ENST00000508063 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
PTPN13-207ENST00000508063 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
PTPN13-207ENST00000508063 POLRMTO00411 1230 aaKnown RBP14.75□□□□□ -0.05
PTPN13-207ENST00000508063 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
PTPN13-207ENST00000508063 PIM2Q9P1W9 311 aa14.75□□□□□ -0.05
PTPN13-207ENST00000508063 ADCY9O60503 1353 aa14.74□□□□□ -0.05
PTPN13-207ENST00000508063 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
PTPN13-207ENST00000508063 GPBP1L1Q9HC44 474 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-207ENST00000508063 IL6STP40189 918 aaPredicted RBP14.73□□□□□ -0.05
PTPN13-207ENST00000508063 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
PTPN13-207ENST00000508063 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
PTPN13-207ENST00000508063 BRCA1P38398 1863 aaKnown RBP14.73□□□□□ -0.05
PTPN13-207ENST00000508063 KCNA3P22001 575 aa14.72□□□□□ -0.05
PTPN13-207ENST00000508063 NFIXQ14938 502 aa14.72□□□□□ -0.05
PTPN13-207ENST00000508063 DALRD3Q5D0E6 543 aaKnown RBP14.72□□□□□ -0.05
PTPN13-207ENST00000508063 ARFGEF1Q9Y6D6 1849 aa14.71□□□□□ -0.05
PTPN13-207ENST00000508063 SERPINB2P05120 415 aa14.71□□□□□ -0.05
PTPN13-207ENST00000508063 MCM10Q7L590 875 aa14.71□□□□□ -0.05
PTPN13-207ENST00000508063 ZNF330Q9Y3S2 320 aaPredicted RBP14.71□□□□□ -0.05
PTPN13-207ENST00000508063 SENP3-EIF4A1A0A087X0R7 540 aa14.7□□□□□ -0.06
PTPN13-207ENST00000508063 ZNF526Q8TF50 670 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-207ENST00000508063 BCL2L12Q9HB09 334 aa14.7□□□□□ -0.06
PTPN13-207ENST00000508063 AFDNP55196 1824 aaKnown RBP14.7□□□□□ -0.06
PTPN13-207ENST00000508063 NRXN2Q9P2S2 1712 aa14.69□□□□□ -0.06
PTPN13-207ENST00000508063 SNRPA1P09661 255 aaKnown RBP14.69□□□□□ -0.06
PTPN13-207ENST00000508063 CHRNA5P30532 468 aa14.69□□□□□ -0.06
PTPN13-207ENST00000508063 POLA2Q14181 598 aa14.69□□□□□ -0.06
PTPN13-207ENST00000508063 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-207ENST00000508063 KCNQ3O43525 872 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 A1BGP04217 495 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 RALBP1Q15311 655 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 PNISRQ8TF01 805 aaKnown RBP14.68□□□□□ -0.06
PTPN13-207ENST00000508063 PDZRN3Q9UPQ7 1066 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
PTPN13-207ENST00000508063 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
PTPN13-207ENST00000508063 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
PTPN13-207ENST00000508063 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
PTPN13-207ENST00000508063 SCN7AQ01118 1682 aa14.67□□□□□ -0.06
PTPN13-207ENST00000508063 CARMIL3Q8ND23 1372 aa14.66□□□□□ -0.06
PTPN13-207ENST00000508063 H0YIN7 160 aa14.66□□□□□ -0.06
PTPN13-207ENST00000508063 TBC1D9BQ66K14 1250 aa14.66□□□□□ -0.06
PTPN13-207ENST00000508063 DZIP3Q86Y13 1208 aaKnown RBP14.66□□□□□ -0.06
PTPN13-207ENST00000508063 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
PTPN13-207ENST00000508063 NPHP1O15259 732 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 PDE6BP35913 854 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 NFE2L2Q16236 605 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 C2CD5Q86YS7 1000 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 PLEKHF1Q96S99 279 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 DLEC1Q9Y238 1755 aa14.65□□□□□ -0.06
PTPN13-207ENST00000508063 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 C9orf131Q5VYM1 1079 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 CLEC4GQ6UXB4 293 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 BRIP1Q9BX63 1249 aa14.64□□□□□ -0.07
PTPN13-207ENST00000508063 RGL2O15211 777 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 348.4 ms