RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
SNCAIP-209ENST00000508017 SNX14Q9Y5W7 946 aa16.2■□□□□ 0.18
SNCAIP-209ENST00000508017 KDRP35968 1356 aa16.2■□□□□ 0.18
SNCAIP-209ENST00000508017 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 N4BP2Q86UW6 1770 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 AK2P54819 239 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 CCDC183Q5T5S1 534 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 TTC12Q9H892 705 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 AOX1Q06278 1338 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 RAD50Q92878 1312 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 ADCY5O95622 1261 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 TTC14Q96N46 770 aa16.19■□□□□ 0.18
SNCAIP-209ENST00000508017 ZSCAN22P10073 491 aaPredicted RBP16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 CPA1P15085 419 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 DNTTIP2Q5QJE6 756 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 TSC1Q92574 1164 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 SGSM2O43147 1006 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 SURF6O75683 361 aaKnown RBP16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 RUFY3Q7L099 469 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 SSH3Q8TE77 659 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 FLT4P35916 1363 aa16.18■□□□□ 0.18
SNCAIP-209ENST00000508017 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 SYT1P21579 422 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 UVSSAQ2YD98 709 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 PHAXQ9H814 394 aaKnown RBP16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 SBNO1A3KN83 1393 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 FIBPO43427 364 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 LARGE1O95461 756 aa16.17■□□□□ 0.18
SNCAIP-209ENST00000508017 STX6O43752 255 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 AMPHP49418 695 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 PIBF1Q8WXW3 757 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 SPG7Q9UQ90 795 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 FAM69CQ0P6D2 419 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 MYRIPQ8NFW9 859 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 RHPN1Q8TCX5 695 aa16.16■□□□□ 0.18
SNCAIP-209ENST00000508017 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 NOLC1Q14978 699 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 F13A1P00488 732 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 UBE2HP62256 183 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 GIMAP6Q6P9H5 292 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
SNCAIP-209ENST00000508017 PXDNLA1KZ92 1463 aa16.14■□□□□ 0.17
SNCAIP-209ENST00000508017 EPB41L2O43491 1005 aaKnown RBP16.14■□□□□ 0.17
SNCAIP-209ENST00000508017 POLA2Q14181 598 aa16.14■□□□□ 0.17
SNCAIP-209ENST00000508017 AP5Z1O43299 807 aa16.14■□□□□ 0.17
SNCAIP-209ENST00000508017 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.17
SNCAIP-209ENST00000508017 SRGAP3O43295 1099 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 PLCB2Q00722 1185 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 NBPF7P0C2Y1 421 aaPredicted RBP16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 MTERF4Q7Z6M4 381 aaKnown RBP16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 FUCA2Q9BTY2 467 aa16.13■□□□□ 0.17
SNCAIP-209ENST00000508017 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 KDM4AO75164 1064 aa16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 ZNF710Q8N1W2 664 aa16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
SNCAIP-209ENST00000508017 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 PRDM4Q9UKN5 801 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 LETM1O95202 739 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 GJB2P29033 226 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 DDX54Q8TDD1 881 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 KIF1BPQ96EK5 621 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
SNCAIP-209ENST00000508017 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 PTH1RQ03431 593 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 UBR1Q8IWV7 1749 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 CRYBG1Q9Y4K1 1723 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 LTV1Q96GA3 475 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 PRDM10Q9NQV6 1147 aa16.1■□□□□ 0.17
SNCAIP-209ENST00000508017 ST3GAL1Q11201 340 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
SNCAIP-209ENST00000508017 PRIMPOLQ96LW4 560 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms