RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 MS4A1P11836 297 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
VEGFC-201ENST00000507638 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 FYCO1Q9BQS8 1478 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 PUS10Q3MIT2 529 aaKnown RBP8.59□□□□□ -1.03
VEGFC-201ENST00000507638 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
VEGFC-201ENST00000507638 STK32BQ9NY57 414 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 METP08581 1390 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 KANK1Q14678 1352 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 THSD7AQ9UPZ6 1657 aa8.59□□□□□ -1.03
VEGFC-201ENST00000507638 FDX1P10109 184 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 SLC15A2Q16348 729 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 KRT28Q7Z3Y7 464 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 NLGN2Q8NFZ4 835 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 THAP11Q96EK4 314 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 TBC1D2Q9BYX2 928 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
VEGFC-201ENST00000507638 LRPPRCP42704 1394 aaKnown RBP8.58□□□□□ -1.04
VEGFC-201ENST00000507638 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
VEGFC-201ENST00000507638 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
VEGFC-201ENST00000507638 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
VEGFC-201ENST00000507638 NRAPQ86VF7 1730 aa8.57□□□□□ -1.04
VEGFC-201ENST00000507638 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 SPTLC1O15269 473 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 ANKLE1Q8NAG6 615 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 ADCY9O60503 1353 aa8.56□□□□□ -1.04
VEGFC-201ENST00000507638 ABCC5O15440 1437 aa8.55□□□□□ -1.04
VEGFC-201ENST00000507638 NEUROD2Q15784 382 aa8.55□□□□□ -1.04
VEGFC-201ENST00000507638 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
VEGFC-201ENST00000507638 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
VEGFC-201ENST00000507638 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
VEGFC-201ENST00000507638 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
VEGFC-201ENST00000507638 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
VEGFC-201ENST00000507638 ARHGEF5Q12774 1597 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 MTMR2Q13614 643 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 ZBTB3Q9H5J0 574 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 USP35Q9P2H5 1018 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
VEGFC-201ENST00000507638 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 TLL1O43897 1013 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 RGS19P49795 217 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 MMP16P51512 607 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 PTF1AQ7RTS3 328 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 USP19O94966 1318 aa8.52□□□□□ -1.05
VEGFC-201ENST00000507638 LMTK2Q8IWU2 1503 aa8.51□□□□□ -1.05
VEGFC-201ENST00000507638 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
VEGFC-201ENST00000507638 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
VEGFC-201ENST00000507638 NRXN3Q9Y4C0 1643 aa8.51□□□□□ -1.05
VEGFC-201ENST00000507638 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 S1PR4O95977 384 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 POLD1P28340 1107 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 CLK2P49760 499 aaKnown RBP8.5□□□□□ -1.05
VEGFC-201ENST00000507638 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
VEGFC-201ENST00000507638 PSME1Q06323 249 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 STRN4Q9NRL3 753 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 KIAA1210Q9ULL0 1709 aa8.5□□□□□ -1.05
VEGFC-201ENST00000507638 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
VEGFC-201ENST00000507638 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
VEGFC-201ENST00000507638 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 RGPD3A6NKT7 1758 aaPredicted RBP8.48□□□□□ -1.05
VEGFC-201ENST00000507638 RGPD4Q7Z3J3 1758 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
VEGFC-201ENST00000507638 KIF15Q9NS87 1388 aa8.48□□□□□ -1.05
VEGFC-201ENST00000507638 SBF2Q86WG5 1849 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 TNS3Q68CZ2 1445 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 ABCA3Q99758 1704 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 CCDC85CA6NKD9 419 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 C11orf95C9JLR9 678 aaPredicted RBP8.47□□□□□ -1.05
VEGFC-201ENST00000507638 JUNDP17535 347 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 NDUFV2P19404 249 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 RPIAP49247 311 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 FSTL1Q12841 308 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 NMRK2Q9NPI5 230 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
VEGFC-201ENST00000507638 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.05
VEGFC-201ENST00000507638 EEA1Q15075 1411 aa8.46□□□□□ -1.05
VEGFC-201ENST00000507638 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.05
VEGFC-201ENST00000507638 FOXN1O15353 648 aa8.46□□□□□ -1.06
VEGFC-201ENST00000507638 C16orf71Q8IYS4 520 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms