RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 THSD7AQ9UPZ6 1657 aa22.63■■□□□ 1.21
ITGA3-207ENST00000506401 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
ITGA3-207ENST00000506401 DDX21Q9NR30 783 aaKnown RBP eCLIP22.63■■□□□ 1.21
ITGA3-207ENST00000506401 HYPKQ9NX55 129 aa22.63■■□□□ 1.21
ITGA3-207ENST00000506401 KCPQ6ZWJ8 1503 aa22.63■■□□□ 1.21
ITGA3-207ENST00000506401 RGS12O14924 1447 aa22.62■■□□□ 1.21
ITGA3-207ENST00000506401 INTS3Q68E01 1043 aaKnown RBP22.62■■□□□ 1.21
ITGA3-207ENST00000506401 FBXO41Q8TF61 875 aa22.62■■□□□ 1.21
ITGA3-207ENST00000506401 PHAXQ9H814 394 aaKnown RBP22.62■■□□□ 1.21
ITGA3-207ENST00000506401 ATG3Q9NT62 314 aa22.62■■□□□ 1.21
ITGA3-207ENST00000506401 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
ITGA3-207ENST00000506401 USP16Q9Y5T5 823 aa22.62■■□□□ 1.21
ITGA3-207ENST00000506401 ONECUT3O60422 494 aaPredicted RBP22.61■■□□□ 1.21
ITGA3-207ENST00000506401 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
ITGA3-207ENST00000506401 ACSBG1Q96GR2 724 aa22.6■■□□□ 1.21
ITGA3-207ENST00000506401 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
ITGA3-207ENST00000506401 ANXA1P04083 346 aa22.59■■□□□ 1.21
ITGA3-207ENST00000506401 TEX13AQ9BXU3 409 aaPredicted RBP22.59■■□□□ 1.21
ITGA3-207ENST00000506401 F6X3S4 739 aa22.58■■□□□ 1.21
ITGA3-207ENST00000506401 CCT4P50991 539 aaKnown RBP22.58■■□□□ 1.21
ITGA3-207ENST00000506401 ZNF772Q68DY9 489 aaPredicted RBP22.58■■□□□ 1.21
ITGA3-207ENST00000506401 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
ITGA3-207ENST00000506401 ZBTB7BO15156 539 aaPredicted RBP22.57■■□□□ 1.2
ITGA3-207ENST00000506401 PDIA6Q15084 440 aa22.57■■□□□ 1.2
ITGA3-207ENST00000506401 PROSER3Q2NL68 480 aa22.57■■□□□ 1.2
ITGA3-207ENST00000506401 RBM42Q9BTD8 480 aaKnown RBP22.57■■□□□ 1.2
ITGA3-207ENST00000506401 ZBTB40Q9NUA8 1239 aa22.57■■□□□ 1.2
ITGA3-207ENST00000506401 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
ITGA3-207ENST00000506401 SEPT12Q8IYM1 358 aa22.57■■□□□ 1.2
ITGA3-207ENST00000506401 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
ITGA3-207ENST00000506401 DDX58O95786 925 aaKnown RBP22.55■■□□□ 1.2
ITGA3-207ENST00000506401 MYL6BP14649 208 aa22.55■■□□□ 1.2
ITGA3-207ENST00000506401 PXDNLA1KZ92 1463 aa22.53■■□□□ 1.2
ITGA3-207ENST00000506401 PI4KAP2A4QPH2 592 aa22.53■■□□□ 1.2
ITGA3-207ENST00000506401 PI4KAP1Q8N8J0 262 aa22.53■■□□□ 1.2
ITGA3-207ENST00000506401 PCDHB15Q9Y5E8 787 aa22.53■■□□□ 1.2
ITGA3-207ENST00000506401 STARD3NLO95772 234 aa22.52■■□□□ 1.2
ITGA3-207ENST00000506401 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
ITGA3-207ENST00000506401 CENPQQ7L2Z9 268 aaPredicted RBP22.52■■□□□ 1.2
ITGA3-207ENST00000506401 DNAAF4Q8WXU2 420 aa22.52■■□□□ 1.2
ITGA3-207ENST00000506401 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
ITGA3-207ENST00000506401 AIMP1Q12904 312 aaKnown RBP22.52■■□□□ 1.2
ITGA3-207ENST00000506401 KCNQ2O43526 872 aa22.51■■□□□ 1.19
ITGA3-207ENST00000506401 A1BGP04217 495 aa22.5■■□□□ 1.19
ITGA3-207ENST00000506401 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
ITGA3-207ENST00000506401 XAGE3Q8WTP9 111 aa22.5■■□□□ 1.19
ITGA3-207ENST00000506401 RWDD1Q9H446 243 aaPredicted RBP22.5■■□□□ 1.19
ITGA3-207ENST00000506401 N4BP2Q86UW6 1770 aaPredicted RBP22.5■■□□□ 1.19
ITGA3-207ENST00000506401 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
ITGA3-207ENST00000506401 COPS6Q7L5N1 327 aa22.5■■□□□ 1.19
ITGA3-207ENST00000506401 PIP4K2AP48426 406 aaPredicted RBP22.49■■□□□ 1.19
ITGA3-207ENST00000506401 MAP3K2Q9Y2U5 619 aa22.49■■□□□ 1.19
ITGA3-207ENST00000506401 KDM2BQ8NHM5 1336 aa22.49■■□□□ 1.19
ITGA3-207ENST00000506401 ADCY9O60503 1353 aa22.49■■□□□ 1.19
ITGA3-207ENST00000506401 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
ITGA3-207ENST00000506401 SRCIN1Q9C0H9 1055 aa22.48■■□□□ 1.19
ITGA3-207ENST00000506401 NBPF26B4DH59 902 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 NBPF10Q6P3W6 841 aaKnown RBP22.47■■□□□ 1.19
ITGA3-207ENST00000506401 RIC3Q7Z5B4 369 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 NBPF15Q8N660 670 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 SLC4A9Q96Q91 983 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 IGHDP01880 384 aa22.47■■□□□ 1.19
ITGA3-207ENST00000506401 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
ITGA3-207ENST00000506401 ANKRD13DQ6ZTN6 518 aa22.46■■□□□ 1.19
ITGA3-207ENST00000506401 PALLDQ8WX93 1383 aa22.46■■□□□ 1.19
ITGA3-207ENST00000506401 GNAI3P08754 354 aa22.45■■□□□ 1.19
ITGA3-207ENST00000506401 BEND3Q5T5X7 828 aa22.45■■□□□ 1.19
ITGA3-207ENST00000506401 MEIS3Q99687 375 aa22.45■■□□□ 1.19
ITGA3-207ENST00000506401 ATP10DQ9P241 1426 aa22.45■■□□□ 1.18
ITGA3-207ENST00000506401 NHSQ6T4R5 1651 aa22.45■■□□□ 1.18
ITGA3-207ENST00000506401 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
ITGA3-207ENST00000506401 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
ITGA3-207ENST00000506401 SIK1P57059 783 aa22.45■■□□□ 1.18
ITGA3-207ENST00000506401 ATP6V1AP38606 617 aa22.44■■□□□ 1.18
ITGA3-207ENST00000506401 HDAC1Q13547 482 aaPredicted RBP22.44■■□□□ 1.18
ITGA3-207ENST00000506401 KRT27Q7Z3Y8 459 aa22.44■■□□□ 1.18
ITGA3-207ENST00000506401 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
ITGA3-207ENST00000506401 SBF2Q86WG5 1849 aa22.44■■□□□ 1.18
ITGA3-207ENST00000506401 TJP1Q07157 1748 aa22.44■■□□□ 1.18
ITGA3-207ENST00000506401 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
ITGA3-207ENST00000506401 NEXNQ0ZGT2 675 aa22.43■■□□□ 1.18
ITGA3-207ENST00000506401 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
ITGA3-207ENST00000506401 BRWD3Q6RI45 1802 aa22.43■■□□□ 1.18
ITGA3-207ENST00000506401 LINS1Q8NG48 757 aa22.42■■□□□ 1.18
ITGA3-207ENST00000506401 BTAF1O14981 1849 aa22.42■■□□□ 1.18
ITGA3-207ENST00000506401 FAM196AQ6ZSG2 479 aa22.41■■□□□ 1.18
ITGA3-207ENST00000506401 METTL22Q9BUU2 404 aaPredicted RBP22.41■■□□□ 1.18
ITGA3-207ENST00000506401 GNAI2P04899 355 aa22.41■■□□□ 1.18
ITGA3-207ENST00000506401 RXRBP28702 533 aa22.41■■□□□ 1.18
ITGA3-207ENST00000506401 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
ITGA3-207ENST00000506401 RPAP2Q8IXW5 612 aaPredicted RBP22.4■■□□□ 1.18
ITGA3-207ENST00000506401 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.18
ITGA3-207ENST00000506401 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.18
ITGA3-207ENST00000506401 UBTFL1P0CB47 393 aaPredicted RBP22.39■■□□□ 1.17
ITGA3-207ENST00000506401 TTLL7Q6ZT98 887 aa22.39■■□□□ 1.17
ITGA3-207ENST00000506401 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
ITGA3-207ENST00000506401 NPM2Q86SE8 214 aaKnown RBP22.38■■□□□ 1.17
ITGA3-207ENST00000506401 ZNF330Q9Y3S2 320 aaPredicted RBP22.38■■□□□ 1.17
ITGA3-207ENST00000506401 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms