RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 FBLN1P23142 703 aa8.35□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 HDGFL1Q5TGJ6 251 aa8.35□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 ADGRB3O60242 1522 aa8.35□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 IQSEC2Q5JU85 1478 aa8.35□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 EXOSC9Q06265 439 aaKnown RBP8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 CFAP53Q96M91 514 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 C3P01024 1663 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 NLRP1Q9C000 1473 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 EPS8L1Q8TE68 723 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 SYMPKQ92797 1274 aaKnown RBP8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 SLC52A1Q9NWF4 448 aa8.34□□□□□ -1.07
NPHP3-AS1-202ENST00000504440 ADGRB1O14514 1584 aa8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 MVPQ14764 893 aaKnown RBP8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 VAC14Q08AM6 782 aa8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 IDI1Q13907 227 aa8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SSH1Q8WYL5 1049 aa8.33□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 EVC2Q86UK5 1308 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 RNF40O75150 1001 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TRIM27P14373 513 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 RFX1P22670 979 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 DZIP1LQ8IYY4 767 aaKnown RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TBC1D32Q96NH3 1257 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 PLEKHF1Q96S99 279 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SMC4Q9NTJ3 1288 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 QRICH2Q9H0J4 1663 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 MYO5BQ9ULV0 1848 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SRPK2P78362 688 aaKnown RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ZKSCAN2Q63HK3 967 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 FTSJ3Q8IY81 847 aaKnown RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 NOB1Q9ULX3 412 aaKnown RBP8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TMEM131LA2VDJ0 1609 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 NINLQ9Y2I6 1382 aa8.32□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 PPLO60437 1756 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 CFHP08603 1231 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 HDGFP51858 240 aaKnown RBP8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ITPRIPQ8IWB1 547 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 BECN1Q14457 450 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TULP4Q9NRJ4 1543 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SETBP1Q9Y6X0 1596 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 A0A1W2PP64 1363 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ANKRD36BQ8N2N9 1353 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 FYB1O15117 783 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 RIPK4P57078 832 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TMEM57Q8N5G2 664 aa8.3□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 NEXMIFQ5QGS0 1516 aa8.29□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 PRAM1Q96QH2 718 aa8.29□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 UPF2Q9HAU5 1272 aaKnown RBP8.29□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 TNRQ92752 1358 aa8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 THUMPD2Q9BTF0 503 aaKnown RBP8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ERBB3P21860 1342 aa8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 VIRMAQ69YN4 1812 aaKnown RBP8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 ATF7IPQ6VMQ6 1270 aa8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 SLF2Q8IX21 1173 aa8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 C22orf23Q9BZE7 217 aa8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 GZF1Q9H116 711 aaPredicted RBP8.28□□□□□ -1.08
NPHP3-AS1-202ENST00000504440 A2ML1A8K2U0 1454 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 NR6A1Q15406 480 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 ATP6V1AP38606 617 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 HSPA2P54652 639 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 PBXIP1Q96AQ6 731 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 CABP1Q9NZU7 370 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 VPS9D1Q9Y2B5 631 aa8.27□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 ZFYVE9O95405 1425 aa8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 ELL2O00472 640 aaPredicted RBP8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 AAMPQ13685 434 aa8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 PUS10Q3MIT2 529 aaKnown RBP8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 UBR1Q8IWV7 1749 aa8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 DIAPH1O60610 1272 aaKnown RBP8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 HMOX1P09601 288 aa8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 PHACTR3Q96KR7 559 aa8.26□□□□□ -1.09
NPHP3-AS1-202ENST00000504440 PPP1R12CQ9BZL4 782 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms