RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CANXP27824 592 aaKnown RBP28.93■■■□□ 2.22
RNF4-205ENST00000504224 C9orf131Q5VYM1 1079 aa28.93■■■□□ 2.22
RNF4-205ENST00000504224 VSIG10Q8N0Z9 540 aa28.93■■■□□ 2.22
RNF4-205ENST00000504224 TEFQ10587 303 aa28.92■■■□□ 2.22
RNF4-205ENST00000504224 GAS2L2Q8NHY3 880 aa28.92■■■□□ 2.22
RNF4-205ENST00000504224 ADAMTS7Q9UKP4 1686 aa28.92■■■□□ 2.22
RNF4-205ENST00000504224 COL3A1P02461 1466 aaPredicted RBP28.91■■■□□ 2.22
RNF4-205ENST00000504224 NFIXQ14938 502 aa28.91■■■□□ 2.22
RNF4-205ENST00000504224 BRCA1P38398 1863 aaKnown RBP28.91■■■□□ 2.22
RNF4-205ENST00000504224 VIRMAQ69YN4 1812 aaKnown RBP28.9■■■□□ 2.22
RNF4-205ENST00000504224 GNAT3A8MTJ3 354 aa28.9■■■□□ 2.22
RNF4-205ENST00000504224 STARD3NLO95772 234 aa28.9■■■□□ 2.22
RNF4-205ENST00000504224 IL17REQ8NFR9 667 aa28.88■■■□□ 2.21
RNF4-205ENST00000504224 NMRK2Q9NPI5 230 aa28.87■■■□□ 2.21
RNF4-205ENST00000504224 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
RNF4-205ENST00000504224 SERPINB2P05120 415 aa28.86■■■□□ 2.21
RNF4-205ENST00000504224 ZNF496Q96IT1 587 aaPredicted RBP28.86■■■□□ 2.21
RNF4-205ENST00000504224 CFAP53Q96M91 514 aa28.86■■■□□ 2.21
RNF4-205ENST00000504224 BCL2L12Q9HB09 334 aa28.86■■■□□ 2.21
RNF4-205ENST00000504224 RNF181Q9P0P0 153 aa28.86■■■□□ 2.21
RNF4-205ENST00000504224 ARFGEF1Q9Y6D6 1849 aa28.85■■■□□ 2.21
RNF4-205ENST00000504224 ZNF790Q6PG37 636 aa28.85■■■□□ 2.21
RNF4-205ENST00000504224 BICDL1Q6ZP65 573 aa28.85■■■□□ 2.21
RNF4-205ENST00000504224 ZNF330Q9Y3S2 320 aaPredicted RBP28.85■■■□□ 2.21
RNF4-205ENST00000504224 A0A087WZG4 1122 aa28.83■■■□□ 2.21
RNF4-205ENST00000504224 TOMM70O94826 608 aa28.83■■■□□ 2.21
RNF4-205ENST00000504224 UBR2Q8IWV8 1755 aa28.83■■■□□ 2.21
RNF4-205ENST00000504224 PRKAR2BP31323 418 aa28.82■■■□□ 2.2
RNF4-205ENST00000504224 TEX13AQ9BXU3 409 aaPredicted RBP28.82■■■□□ 2.2
RNF4-205ENST00000504224 HEG1Q9ULI3 1381 aa28.82■■■□□ 2.2
RNF4-205ENST00000504224 EIF5P55010 431 aaKnown RBP28.81■■■□□ 2.2
RNF4-205ENST00000504224 C16orf71Q8IYS4 520 aaPredicted RBP28.8■■■□□ 2.2
RNF4-205ENST00000504224 PHACTR3Q96KR7 559 aa28.8■■■□□ 2.2
RNF4-205ENST00000504224 FMNL2Q96PY5 1086 aa28.8■■■□□ 2.2
RNF4-205ENST00000504224 NUDCQ9Y266 331 aa28.8■■■□□ 2.2
RNF4-205ENST00000504224 C2CD5Q86YS7 1000 aa28.79■■■□□ 2.2
RNF4-205ENST00000504224 NPM2Q86SE8 214 aaKnown RBP28.78■■■□□ 2.2
RNF4-205ENST00000504224 RSPH6AQ9H0K4 717 aa28.78■■■□□ 2.2
RNF4-205ENST00000504224 TBC1D2BQ9UPU7 963 aa28.78■■■□□ 2.2
RNF4-205ENST00000504224 AFDNP55196 1824 aaKnown RBP28.78■■■□□ 2.2
RNF4-205ENST00000504224 KDM2BQ8NHM5 1336 aa28.77■■■□□ 2.2
RNF4-205ENST00000504224 BTBD11A6QL63 1104 aa28.77■■■□□ 2.2
RNF4-205ENST00000504224 RASSF7Q02833 373 aa28.77■■■□□ 2.2
RNF4-205ENST00000504224 H0YIN7 160 aa28.76■■■□□ 2.19
RNF4-205ENST00000504224 U2AF1L5P0DN76 240 aaPredicted RBP28.76■■■□□ 2.19
RNF4-205ENST00000504224 APLP1P51693 650 aa28.76■■■□□ 2.19
RNF4-205ENST00000504224 U2AF1Q01081 240 aaKnown RBP eCLIP28.76■■■□□ 2.19
RNF4-205ENST00000504224 TBC1D9BQ66K14 1250 aa28.76■■■□□ 2.19
RNF4-205ENST00000504224 TTLL6Q8N841 843 aa28.76■■■□□ 2.19
RNF4-205ENST00000504224 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
RNF4-205ENST00000504224 KCNQ3O43525 872 aa28.75■■■□□ 2.19
RNF4-205ENST00000504224 CEMIPQ8WUJ3 1361 aa28.75■■■□□ 2.19
RNF4-205ENST00000504224 NRXN2Q9P2S2 1712 aa28.74■■■□□ 2.19
RNF4-205ENST00000504224 A1BGP04217 495 aa28.74■■■□□ 2.19
RNF4-205ENST00000504224 IL6STP40189 918 aaPredicted RBP28.74■■■□□ 2.19
RNF4-205ENST00000504224 RRAGCQ9HB90 399 aa28.73■■■□□ 2.19
RNF4-205ENST00000504224 PPP2R1AP30153 589 aa28.72■■■□□ 2.19
RNF4-205ENST00000504224 RBM46Q8TBY0 533 aaKnown RBP28.72■■■□□ 2.19
RNF4-205ENST00000504224 RTF1Q92541 710 aaKnown RBP28.72■■■□□ 2.19
RNF4-205ENST00000504224 SIPA1L3O60292 1781 aaPredicted RBP28.72■■■□□ 2.19
RNF4-205ENST00000504224 CCDC24Q8N4L8 307 aa28.71■■■□□ 2.19
RNF4-205ENST00000504224 ZNF622Q969S3 477 aaKnown RBP eCLIP28.71■■■□□ 2.19
RNF4-205ENST00000504224 NPHP1O15259 732 aa28.7■■■□□ 2.18
RNF4-205ENST00000504224 LMNB1P20700 586 aa28.69■■■□□ 2.18
RNF4-205ENST00000504224 MCM10Q7L590 875 aa28.69■■■□□ 2.18
RNF4-205ENST00000504224 PDE6BP35913 854 aa28.68■■■□□ 2.18
RNF4-205ENST00000504224 SETDB2Q96T68 719 aa28.68■■■□□ 2.18
RNF4-205ENST00000504224 PIP4K2AP48426 406 aaPredicted RBP28.67■■■□□ 2.18
RNF4-205ENST00000504224 PRR5LQ6MZQ0 368 aa28.67■■■□□ 2.18
RNF4-205ENST00000504224 DZIP3Q86Y13 1208 aaKnown RBP28.67■■■□□ 2.18
RNF4-205ENST00000504224 BRIP1Q9BX63 1249 aa28.67■■■□□ 2.18
RNF4-205ENST00000504224 ZNF219Q9P2Y4 722 aaPredicted RBP28.67■■■□□ 2.18
RNF4-205ENST00000504224 USP16Q9Y5T5 823 aa28.67■■■□□ 2.18
RNF4-205ENST00000504224 SCN7AQ01118 1682 aa28.67■■■□□ 2.18
RNF4-205ENST00000504224 DLEC1Q9Y238 1755 aa28.66■■■□□ 2.18
RNF4-205ENST00000504224 CAMTA2O94983 1202 aa28.66■■■□□ 2.18
RNF4-205ENST00000504224 SBF1O95248 1867 aa28.66■■■□□ 2.18
RNF4-205ENST00000504224 DCTN1Q14203 1278 aa28.65■■■□□ 2.18
RNF4-205ENST00000504224 CNBD1Q8NA66 436 aa28.65■■■□□ 2.18
RNF4-205ENST00000504224 PDZRN3Q9UPQ7 1066 aa28.65■■■□□ 2.18
RNF4-205ENST00000504224 ZC3H4Q9UPT8 1303 aaKnown RBP28.65■■■□□ 2.18
RNF4-205ENST00000504224 PRAMEF22A3QJZ6 481 aa28.64■■■□□ 2.18
RNF4-205ENST00000504224 PRELPP51888 382 aa28.64■■■□□ 2.18
RNF4-205ENST00000504224 FSTL1Q12841 308 aa28.64■■■□□ 2.18
RNF4-205ENST00000504224 NFKBIEO00221 500 aa28.63■■■□□ 2.17
RNF4-205ENST00000504224 C21orf2O43822 256 aa28.62■■■□□ 2.17
RNF4-205ENST00000504224 SNRPA1P09661 255 aaKnown RBP28.62■■■□□ 2.17
RNF4-205ENST00000504224 ST5P78524 1137 aa28.62■■■□□ 2.17
RNF4-205ENST00000504224 IFFO2Q5TF58 517 aa28.62■■■□□ 2.17
RNF4-205ENST00000504224 GLTPD2A6NH11 291 aa28.6■■■□□ 2.17
RNF4-205ENST00000504224 DNAJC5GQ8N7S2 189 aa28.6■■■□□ 2.17
RNF4-205ENST00000504224 TNRC6CQ9HCJ0 1690 aaKnown RBP28.6■■■□□ 2.17
RNF4-205ENST00000504224 ANKRD31Q8N7Z5 1873 aa28.59■■■□□ 2.17
RNF4-205ENST00000504224 HTRA3P83110 453 aa28.59■■■□□ 2.17
RNF4-205ENST00000504224 HTATSF1O43719 755 aaKnown RBP28.58■■■□□ 2.17
RNF4-205ENST00000504224 NEFMP07197 916 aa28.57■■■□□ 2.16
RNF4-205ENST00000504224 SMC1BQ8NDV3 1235 aa28.57■■■□□ 2.16
RNF4-205ENST00000504224 ZNF652Q9Y2D9 606 aa28.57■■■□□ 2.16
RNF4-205ENST00000504224 VEGFAP15692 232 aaPredicted RBP28.56■■■□□ 2.16
RNF4-205ENST00000504224 TAF7Q15545 349 aaPredicted RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms