RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 USP21Q9UK80 565 aa12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF28-206ENST00000504003 TBC1D12O60347 775 aa12.02□□□□□ -0.49
ARHGEF28-206ENST00000504003 PLPP6Q8IY26 295 aa12.02□□□□□ -0.49
ARHGEF28-206ENST00000504003 USP35Q9P2H5 1018 aa12.02□□□□□ -0.49
ARHGEF28-206ENST00000504003 NRAPQ86VF7 1730 aa12.02□□□□□ -0.49
ARHGEF28-206ENST00000504003 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.02□□□□□ -0.49
ARHGEF28-206ENST00000504003 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
ARHGEF28-206ENST00000504003 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
ARHGEF28-206ENST00000504003 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
ARHGEF28-206ENST00000504003 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
ARHGEF28-206ENST00000504003 LRP6O75581 1613 aa12□□□□□ -0.49
ARHGEF28-206ENST00000504003 VPS72Q15906 364 aa12□□□□□ -0.49
ARHGEF28-206ENST00000504003 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
ARHGEF28-206ENST00000504003 ZNF772Q68DY9 489 aaPredicted RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 WWC1Q8IX03 1113 aa12□□□□□ -0.49
ARHGEF28-206ENST00000504003 RGS17Q9UGC6 210 aaPredicted RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
ARHGEF28-206ENST00000504003 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 AFF2P51816 1311 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 SPATA31A1Q5TZJ5 1347 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 MAP3K5Q99683 1374 aa11.99□□□□□ -0.49
ARHGEF28-206ENST00000504003 DLG5Q8TDM6 1919 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 OVOS2A0A0G2JMS6 1433 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 IL16Q14005 1332 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 SPATA31A5Q5VU36 1347 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 SPATA31A7Q8IWB4 1347 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 E9PSI1 815 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 EXOC5O00471 708 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
ARHGEF28-206ENST00000504003 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
ARHGEF28-206ENST00000504003 GNAI1P63096 354 aa11.97□□□□□ -0.49
ARHGEF28-206ENST00000504003 DSG2Q14126 1118 aa11.97□□□□□ -0.49
ARHGEF28-206ENST00000504003 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
ARHGEF28-206ENST00000504003 A0A0G2JS52 829 aa11.96□□□□□ -0.49
ARHGEF28-206ENST00000504003 MYT1Q01538 1121 aa11.96□□□□□ -0.49
ARHGEF28-206ENST00000504003 DDB1Q16531 1140 aa11.96□□□□□ -0.49
ARHGEF28-206ENST00000504003 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
ARHGEF28-206ENST00000504003 PKD1L3Q7Z443 1732 aa11.96□□□□□ -0.49
ARHGEF28-206ENST00000504003 MEGF6O75095 1541 aa11.96□□□□□ -0.5
ARHGEF28-206ENST00000504003 WNK3Q9BYP7 1800 aa11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 TEFQ10587 303 aa11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 QTRT2Q9H974 415 aaKnown RBP11.95□□□□□ -0.5
ARHGEF28-206ENST00000504003 ZNF521Q96K83 1311 aa11.94□□□□□ -0.5
ARHGEF28-206ENST00000504003 PHKG2P15735 406 aa11.94□□□□□ -0.5
ARHGEF28-206ENST00000504003 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
ARHGEF28-206ENST00000504003 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
ARHGEF28-206ENST00000504003 BABAM1Q9NWV8 329 aa11.94□□□□□ -0.5
ARHGEF28-206ENST00000504003 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
ARHGEF28-206ENST00000504003 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
ARHGEF28-206ENST00000504003 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
ARHGEF28-206ENST00000504003 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
ARHGEF28-206ENST00000504003 ATRNO75882 1429 aa11.93□□□□□ -0.5
ARHGEF28-206ENST00000504003 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 MCM10Q7L590 875 aa11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 DISP2A7MBM2 1401 aa11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
ARHGEF28-206ENST00000504003 TK2O00142 265 aa11.91□□□□□ -0.5
ARHGEF28-206ENST00000504003 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
ARHGEF28-206ENST00000504003 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
ARHGEF28-206ENST00000504003 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
ARHGEF28-206ENST00000504003 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 CT47B1P0C2W7 299 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 CABP4P57796 275 aa11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF28-206ENST00000504003 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.51
ARHGEF28-206ENST00000504003 CYP27B1O15528 508 aa11.89□□□□□ -0.51
ARHGEF28-206ENST00000504003 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
ARHGEF28-206ENST00000504003 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
ARHGEF28-206ENST00000504003 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
ARHGEF28-206ENST00000504003 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
ARHGEF28-206ENST00000504003 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 RXRBP28702 533 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 TTC5Q8N0Z6 440 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
ARHGEF28-206ENST00000504003 LRRC37A3O60309 1634 aa11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 CHL1O00533 1208 aa11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 TRMT2AQ8IZ69 625 aaKnown RBP11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms