RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 A0A0G2JLW4 131 aa25.93■■□□□ 1.74
UBE2D3-215ENST00000503418 CANXP27824 592 aaKnown RBP25.93■■□□□ 1.74
UBE2D3-215ENST00000503418 HEG1Q9ULI3 1381 aa25.93■■□□□ 1.74
UBE2D3-215ENST00000503418 STARD3NLO95772 234 aa25.92■■□□□ 1.74
UBE2D3-215ENST00000503418 DDR1Q08345 913 aa25.92■■□□□ 1.74
UBE2D3-215ENST00000503418 RTF1Q92541 710 aaKnown RBP25.92■■□□□ 1.74
UBE2D3-215ENST00000503418 BTBD11A6QL63 1104 aa25.91■■□□□ 1.74
UBE2D3-215ENST00000503418 DPEP1P16444 411 aa25.9■■□□□ 1.74
UBE2D3-215ENST00000503418 MCM10Q7L590 875 aa25.9■■□□□ 1.74
UBE2D3-215ENST00000503418 FMNL2Q96PY5 1086 aa25.9■■□□□ 1.74
UBE2D3-215ENST00000503418 NARFQ9UHQ1 456 aa25.9■■□□□ 1.74
UBE2D3-215ENST00000503418 BCS1LQ9Y276 419 aa25.89■■□□□ 1.74
UBE2D3-215ENST00000503418 BRCA1P38398 1863 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-215ENST00000503418 POLRMTO00411 1230 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-215ENST00000503418 TEX13AQ9BXU3 409 aaPredicted RBP25.88■■□□□ 1.73
UBE2D3-215ENST00000503418 KCNQ3O43525 872 aa25.87■■□□□ 1.73
UBE2D3-215ENST00000503418 TM4SF1P30408 202 aa25.87■■□□□ 1.73
UBE2D3-215ENST00000503418 ZNF330Q9Y3S2 320 aaPredicted RBP25.87■■□□□ 1.73
UBE2D3-215ENST00000503418 NEFMP07197 916 aa25.86■■□□□ 1.73
UBE2D3-215ENST00000503418 DCTN1Q14203 1278 aa25.86■■□□□ 1.73
UBE2D3-215ENST00000503418 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
UBE2D3-215ENST00000503418 AFDNP55196 1824 aaKnown RBP25.86■■□□□ 1.73
UBE2D3-215ENST00000503418 GIGYF1O75420 1035 aaPredicted RBP25.85■■□□□ 1.73
UBE2D3-215ENST00000503418 NFIXQ14938 502 aa25.85■■□□□ 1.73
UBE2D3-215ENST00000503418 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
UBE2D3-215ENST00000503418 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
UBE2D3-215ENST00000503418 A0A087WZG4 1122 aa25.83■■□□□ 1.73
UBE2D3-215ENST00000503418 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
UBE2D3-215ENST00000503418 HTATSF1O43719 755 aaKnown RBP25.82■■□□□ 1.72
UBE2D3-215ENST00000503418 ADCY9O60503 1353 aa25.82■■□□□ 1.72
UBE2D3-215ENST00000503418 A1BGP04217 495 aa25.81■■□□□ 1.72
UBE2D3-215ENST00000503418 KCNA3P22001 575 aa25.81■■□□□ 1.72
UBE2D3-215ENST00000503418 C1QTNF8P60827 252 aa25.81■■□□□ 1.72
UBE2D3-215ENST00000503418 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 ARFGEF1Q9Y6D6 1849 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 CHRNA5P30532 468 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 BICDL1Q6ZP65 573 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 NPM2Q86SE8 214 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 ZNF526Q8TF50 670 aaPredicted RBP25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 PIM2Q9P1W9 311 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 NRXN2Q9P2S2 1712 aa25.8■■□□□ 1.72
UBE2D3-215ENST00000503418 SERPINB2P05120 415 aa25.79■■□□□ 1.72
UBE2D3-215ENST00000503418 IL6STP40189 918 aaPredicted RBP25.79■■□□□ 1.72
UBE2D3-215ENST00000503418 ARHGAP27Q6ZUM4 889 aa25.79■■□□□ 1.72
UBE2D3-215ENST00000503418 TBC1D2BQ9UPU7 963 aa25.79■■□□□ 1.72
UBE2D3-215ENST00000503418 PRAMEF22A3QJZ6 481 aa25.78■■□□□ 1.72
UBE2D3-215ENST00000503418 RALBP1Q15311 655 aa25.78■■□□□ 1.72
UBE2D3-215ENST00000503418 USP16Q9Y5T5 823 aa25.78■■□□□ 1.72
UBE2D3-215ENST00000503418 DALRD3Q5D0E6 543 aaKnown RBP25.77■■□□□ 1.72
UBE2D3-215ENST00000503418 PLEKHF1Q96S99 279 aa25.77■■□□□ 1.72
UBE2D3-215ENST00000503418 GPBP1L1Q9HC44 474 aaPredicted RBP25.77■■□□□ 1.72
UBE2D3-215ENST00000503418 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
UBE2D3-215ENST00000503418 TAF7Q15545 349 aaPredicted RBP25.76■■□□□ 1.71
UBE2D3-215ENST00000503418 MAPK8IP3Q9UPT6 1336 aa25.76■■□□□ 1.71
UBE2D3-215ENST00000503418 PIP4K2AP48426 406 aaPredicted RBP25.75■■□□□ 1.71
UBE2D3-215ENST00000503418 TBC1D9BQ66K14 1250 aa25.75■■□□□ 1.71
UBE2D3-215ENST00000503418 PNNQ9H307 717 aaKnown RBP25.75■■□□□ 1.71
UBE2D3-215ENST00000503418 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
UBE2D3-215ENST00000503418 MIS18AQ9NYP9 233 aa25.74■■□□□ 1.71
UBE2D3-215ENST00000503418 BCORQ6W2J9 1755 aa25.73■■□□□ 1.71
UBE2D3-215ENST00000503418 DZIP3Q86Y13 1208 aaKnown RBP25.72■■□□□ 1.71
UBE2D3-215ENST00000503418 CARMIL3Q8ND23 1372 aa25.71■■□□□ 1.71
UBE2D3-215ENST00000503418 SENP3-EIF4A1A0A087X0R7 540 aa25.71■■□□□ 1.71
UBE2D3-215ENST00000503418 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
UBE2D3-215ENST00000503418 DLEC1Q9Y238 1755 aa25.71■■□□□ 1.71
UBE2D3-215ENST00000503418 KDM3BQ7LBC6 1761 aa25.7■■□□□ 1.7
UBE2D3-215ENST00000503418 THUMPD2Q9BTF0 503 aaKnown RBP25.7■■□□□ 1.7
UBE2D3-215ENST00000503418 LAMB4A4D0S4 1761 aa25.69■■□□□ 1.7
UBE2D3-215ENST00000503418 PNISRQ8TF01 805 aaKnown RBP25.69■■□□□ 1.7
UBE2D3-215ENST00000503418 MYBBP1AQ9BQG0 1328 aaKnown RBP25.68■■□□□ 1.7
UBE2D3-215ENST00000503418 C2CD5Q86YS7 1000 aa25.68■■□□□ 1.7
UBE2D3-215ENST00000503418 ANKRD31Q8N7Z5 1873 aa25.68■■□□□ 1.7
UBE2D3-215ENST00000503418 NPHP1O15259 732 aa25.67■■□□□ 1.7
UBE2D3-215ENST00000503418 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
UBE2D3-215ENST00000503418 H0YIN7 160 aa25.66■■□□□ 1.7
UBE2D3-215ENST00000503418 CCDC24Q8N4L8 307 aa25.66■■□□□ 1.7
UBE2D3-215ENST00000503418 C9orf131Q5VYM1 1079 aa25.65■■□□□ 1.7
UBE2D3-215ENST00000503418 PRR5LQ6MZQ0 368 aa25.65■■□□□ 1.7
UBE2D3-215ENST00000503418 NBPF26B4DH59 902 aa25.64■■□□□ 1.7
UBE2D3-215ENST00000503418 NBPF10Q6P3W6 841 aaKnown RBP25.64■■□□□ 1.7
UBE2D3-215ENST00000503418 NBPF15Q8N660 670 aa25.64■■□□□ 1.7
UBE2D3-215ENST00000503418 TTLL6Q8N841 843 aa25.64■■□□□ 1.7
UBE2D3-215ENST00000503418 CNBD1Q8NA66 436 aa25.63■■□□□ 1.69
UBE2D3-215ENST00000503418 ZNF652Q9Y2D9 606 aa25.63■■□□□ 1.69
UBE2D3-215ENST00000503418 SBF1O95248 1867 aa25.62■■□□□ 1.69
UBE2D3-215ENST00000503418 PDE6BP35913 854 aa25.62■■□□□ 1.69
UBE2D3-215ENST00000503418 RIPK4P57078 832 aa25.62■■□□□ 1.69
UBE2D3-215ENST00000503418 BRIP1Q9BX63 1249 aa25.62■■□□□ 1.69
UBE2D3-215ENST00000503418 COL11A2P13942 1736 aaPredicted RBP25.62■■□□□ 1.69
UBE2D3-215ENST00000503418 EIF4A1P60842 406 aaKnown RBP25.61■■□□□ 1.69
UBE2D3-215ENST00000503418 ST5P78524 1137 aa25.61■■□□□ 1.69
UBE2D3-215ENST00000503418 CLEC4GQ6UXB4 293 aa25.61■■□□□ 1.69
UBE2D3-215ENST00000503418 ZNF622Q969S3 477 aaKnown RBP eCLIP25.61■■□□□ 1.69
UBE2D3-215ENST00000503418 RNF181Q9P0P0 153 aa25.61■■□□□ 1.69
UBE2D3-215ENST00000503418 RASSF7Q02833 373 aa25.6■■□□□ 1.69
UBE2D3-215ENST00000503418 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
UBE2D3-215ENST00000503418 NGEFQ8N5V2 710 aa25.59■■□□□ 1.69
UBE2D3-215ENST00000503418 TSPYL4Q9UJ04 414 aa25.59■■□□□ 1.69
UBE2D3-215ENST00000503418 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms