RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
CLCN3-203ENST00000502998 PPME1Q9Y570 386 aa7.89□□□□□ -1.15
CLCN3-203ENST00000502998 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
CLCN3-203ENST00000502998 NKTRP30414 1462 aaKnown RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 ANKRD18BA2A2Z9 1011 aa7.88□□□□□ -1.15
CLCN3-203ENST00000502998 EPB41L2O43491 1005 aaKnown RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 ST18O60284 1047 aa7.88□□□□□ -1.15
CLCN3-203ENST00000502998 PPP1R15AO75807 674 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 NUTM2DQ5VT03 806 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 ATL2Q8NHH9 583 aa7.88□□□□□ -1.15
CLCN3-203ENST00000502998 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 SUFUQ9UMX1 484 aa7.88□□□□□ -1.15
CLCN3-203ENST00000502998 DDX49Q9Y6V7 483 aaKnown RBP7.88□□□□□ -1.15
CLCN3-203ENST00000502998 EP400Q96L91 3159 aa7.88□□□□□ -1.15
CLCN3-203ENST00000502998 CHD2O14647 1828 aaKnown RBP7.87□□□□□ -1.15
CLCN3-203ENST00000502998 ERBB4Q15303 1308 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 FRAT2O75474 233 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-203ENST00000502998 ABCD1P33897 745 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 MCM5P33992 734 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 HDGFP51858 240 aaKnown RBP7.87□□□□□ -1.15
CLCN3-203ENST00000502998 RHBDL3P58872 404 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 CBX1P83916 185 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 BECN1Q14457 450 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 PUS10Q3MIT2 529 aaKnown RBP7.87□□□□□ -1.15
CLCN3-203ENST00000502998 KLHL23Q8NBE8 558 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 SLAIN1Q8ND83 568 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 ZBTB9Q96C00 473 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 BACH2Q9BYV9 841 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 CXorf56Q9H5V9 222 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 PCDHB13Q9Y5F0 798 aa7.87□□□□□ -1.15
CLCN3-203ENST00000502998 ADAMTS13Q76LX8 1427 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 CCDC173Q0VFZ6 552 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 NEXNQ0ZGT2 675 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 B4GALNT3Q6L9W6 998 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 UPF2Q9HAU5 1272 aaKnown RBP7.86□□□□□ -1.15
CLCN3-203ENST00000502998 PHF8Q9UPP1 1060 aa7.86□□□□□ -1.15
CLCN3-203ENST00000502998 RRBP1Q9P2E9 1410 aaKnown RBP7.86□□□□□ -1.15
CLCN3-203ENST00000502998 MSH6P52701 1360 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 FAM200BP0CF97 657 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 MAGEA8P43361 318 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 GSCP56915 257 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 CCT2P78371 535 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 HMGN5P82970 282 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 SF3A1Q15459 793 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 JAKMIP3Q5VZ66 844 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 PDCL2Q8N4E4 241 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 NOL10Q9BSC4 688 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 TACO1Q9BSH4 297 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 TMX4Q9H1E5 349 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 CWC25Q9NXE8 425 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 OGFRQ9NZT2 677 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 SUGT1Q9Y2Z0 365 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 R3HCC1Q9Y3T6 440 aaKnown RBP7.85□□□□□ -1.15
CLCN3-203ENST00000502998 TBX22Q9Y458 520 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 SPHKAPQ2M3C7 1700 aa7.85□□□□□ -1.15
CLCN3-203ENST00000502998 DIP2AQ14689 1571 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 IL16Q14005 1332 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 SMAPO00193 183 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 PDE4AP27815 886 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 PSMC1P62191 440 aaKnown RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 IRX1P78414 480 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 KIAA2012Q0VF49 1180 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 ZSCAN26Q16670 478 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 DZIP3Q86Y13 1208 aaKnown RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 FAM184AQ8NB25 1140 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 ACRBPQ8NEB7 543 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 PIK3R5Q8WYR1 880 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 PRIMPOLQ96LW4 560 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 JADE2Q9NQC1 790 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 CHCHD3Q9NX63 227 aaKnown RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 CWC15Q9P013 229 aaKnown RBP7.84□□□□□ -1.15
CLCN3-203ENST00000502998 RSPH14Q9UHP6 348 aa7.84□□□□□ -1.15
CLCN3-203ENST00000502998 SPATA31A6Q5VVP1 1343 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 RPGRIP1LQ68CZ1 1315 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 SMARCA5O60264 1052 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-203ENST00000502998 RXRBP28702 533 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 ATP6V1AP38606 617 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 NAP1L1P55209 391 aaKnown RBP7.83□□□□□ -1.16
CLCN3-203ENST00000502998 GJC2Q5T442 439 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-203ENST00000502998 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-203ENST00000502998 KLHL10Q6JEL2 608 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 PPP1R9BQ96SB3 815 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 GZF1Q9H116 711 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-203ENST00000502998 POGKQ9P215 609 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 SUN2Q9UH99 717 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 RGS12O14924 1447 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 NAIPQ13075 1403 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 PIK3R4Q99570 1358 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 TRPM2O94759 1503 aa7.83□□□□□ -1.16
CLCN3-203ENST00000502998 CDK12Q9NYV4 1490 aaPredicted RBP7.82□□□□□ -1.16
CLCN3-203ENST00000502998 CLTCL1P53675 1640 aa7.82□□□□□ -1.16
CLCN3-203ENST00000502998 NRXN3Q9Y4C0 1643 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms