RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ZNF496Q96IT1 587 aaPredicted RBP26.35■■□□□ 1.81
SFXN1-203ENST00000502393 TEX13AQ9BXU3 409 aaPredicted RBP26.35■■□□□ 1.81
SFXN1-203ENST00000502393 NARFQ9UHQ1 456 aa26.35■■□□□ 1.81
SFXN1-203ENST00000502393 SIPA1L3O60292 1781 aaPredicted RBP26.34■■□□□ 1.81
SFXN1-203ENST00000502393 DDR1Q08345 913 aa26.34■■□□□ 1.81
SFXN1-203ENST00000502393 HEG1Q9ULI3 1381 aa26.33■■□□□ 1.81
SFXN1-203ENST00000502393 N4BP2Q86UW6 1770 aaPredicted RBP26.33■■□□□ 1.81
SFXN1-203ENST00000502393 DPEP1P16444 411 aa26.33■■□□□ 1.81
SFXN1-203ENST00000502393 POLRMTO00411 1230 aaKnown RBP26.32■■□□□ 1.8
SFXN1-203ENST00000502393 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
SFXN1-203ENST00000502393 C1QTNF8P60827 252 aa26.32■■□□□ 1.8
SFXN1-203ENST00000502393 BCS1LQ9Y276 419 aa26.32■■□□□ 1.8
SFXN1-203ENST00000502393 BTBD11A6QL63 1104 aa26.31■■□□□ 1.8
SFXN1-203ENST00000502393 CANXP27824 592 aaKnown RBP26.31■■□□□ 1.8
SFXN1-203ENST00000502393 RTF1Q92541 710 aaKnown RBP26.31■■□□□ 1.8
SFXN1-203ENST00000502393 FMNL2Q96PY5 1086 aa26.31■■□□□ 1.8
SFXN1-203ENST00000502393 ADCY9O60503 1353 aa26.31■■□□□ 1.8
SFXN1-203ENST00000502393 ATP10DQ9P241 1426 aa26.31■■□□□ 1.8
SFXN1-203ENST00000502393 KCNA3P22001 575 aa26.29■■□□□ 1.8
SFXN1-203ENST00000502393 EIF5P55010 431 aaKnown RBP26.29■■□□□ 1.8
SFXN1-203ENST00000502393 A0A087WZG4 1122 aa26.28■■□□□ 1.8
SFXN1-203ENST00000502393 HTATSF1O43719 755 aaKnown RBP26.28■■□□□ 1.8
SFXN1-203ENST00000502393 NFIXQ14938 502 aa26.27■■□□□ 1.8
SFXN1-203ENST00000502393 BCL2L12Q9HB09 334 aa26.27■■□□□ 1.8
SFXN1-203ENST00000502393 PIM2Q9P1W9 311 aa26.27■■□□□ 1.8
SFXN1-203ENST00000502393 MCM10Q7L590 875 aa26.26■■□□□ 1.79
SFXN1-203ENST00000502393 BRCA1P38398 1863 aaKnown RBP26.25■■□□□ 1.79
SFXN1-203ENST00000502393 KCNQ3O43525 872 aa26.24■■□□□ 1.79
SFXN1-203ENST00000502393 IL6STP40189 918 aaPredicted RBP26.24■■□□□ 1.79
SFXN1-203ENST00000502393 GPBP1L1Q9HC44 474 aaPredicted RBP26.24■■□□□ 1.79
SFXN1-203ENST00000502393 NEFMP07197 916 aa26.23■■□□□ 1.79
SFXN1-203ENST00000502393 ARHGAP27Q6ZUM4 889 aa26.23■■□□□ 1.79
SFXN1-203ENST00000502393 DALRD3Q5D0E6 543 aaKnown RBP26.22■■□□□ 1.79
SFXN1-203ENST00000502393 A1BGP04217 495 aa26.21■■□□□ 1.79
SFXN1-203ENST00000502393 SERPINB2P05120 415 aa26.21■■□□□ 1.79
SFXN1-203ENST00000502393 NRXN2Q9P2S2 1712 aa26.2■■□□□ 1.79
SFXN1-203ENST00000502393 CHRNA5P30532 468 aa26.2■■□□□ 1.78
SFXN1-203ENST00000502393 DCTN1Q14203 1278 aa26.2■■□□□ 1.78
SFXN1-203ENST00000502393 NPM2Q86SE8 214 aaKnown RBP26.2■■□□□ 1.78
SFXN1-203ENST00000502393 ZNF330Q9Y3S2 320 aaPredicted RBP26.19■■□□□ 1.78
SFXN1-203ENST00000502393 SNRPA1P09661 255 aaKnown RBP26.18■■□□□ 1.78
SFXN1-203ENST00000502393 TAF7Q15545 349 aaPredicted RBP26.18■■□□□ 1.78
SFXN1-203ENST00000502393 ZNF526Q8TF50 670 aaPredicted RBP26.18■■□□□ 1.78
SFXN1-203ENST00000502393 PLEKHF1Q96S99 279 aa26.18■■□□□ 1.78
SFXN1-203ENST00000502393 PNNQ9H307 717 aaKnown RBP26.18■■□□□ 1.78
SFXN1-203ENST00000502393 TBC1D2BQ9UPU7 963 aa26.18■■□□□ 1.78
SFXN1-203ENST00000502393 USP16Q9Y5T5 823 aa26.18■■□□□ 1.78
SFXN1-203ENST00000502393 AFDNP55196 1824 aaKnown RBP26.18■■□□□ 1.78
SFXN1-203ENST00000502393 ARFGEF1Q9Y6D6 1849 aa26.18■■□□□ 1.78
SFXN1-203ENST00000502393 SENP3-EIF4A1A0A087X0R7 540 aa26.17■■□□□ 1.78
SFXN1-203ENST00000502393 RALBP1Q15311 655 aa26.16■■□□□ 1.78
SFXN1-203ENST00000502393 TBC1D9BQ66K14 1250 aa26.16■■□□□ 1.78
SFXN1-203ENST00000502393 BICDL1Q6ZP65 573 aa26.16■■□□□ 1.78
SFXN1-203ENST00000502393 SCN7AQ01118 1682 aa26.15■■□□□ 1.78
SFXN1-203ENST00000502393 PRAMEF22A3QJZ6 481 aa26.14■■□□□ 1.78
SFXN1-203ENST00000502393 CAMTA2O94983 1202 aa26.13■■□□□ 1.77
SFXN1-203ENST00000502393 CARMIL3Q8ND23 1372 aa26.12■■□□□ 1.77
SFXN1-203ENST00000502393 NFE2L2Q16236 605 aa26.12■■□□□ 1.77
SFXN1-203ENST00000502393 DZIP3Q86Y13 1208 aaKnown RBP26.12■■□□□ 1.77
SFXN1-203ENST00000502393 PNISRQ8TF01 805 aaKnown RBP26.11■■□□□ 1.77
SFXN1-203ENST00000502393 SETDB2Q96T68 719 aa26.11■■□□□ 1.77
SFXN1-203ENST00000502393 H0YIN7 160 aa26.1■■□□□ 1.77
SFXN1-203ENST00000502393 C9orf131Q5VYM1 1079 aa26.1■■□□□ 1.77
SFXN1-203ENST00000502393 C2CD5Q86YS7 1000 aa26.1■■□□□ 1.77
SFXN1-203ENST00000502393 MAPK8IP3Q9UPT6 1336 aa26.1■■□□□ 1.77
SFXN1-203ENST00000502393 PIP4K2AP48426 406 aaPredicted RBP26.09■■□□□ 1.77
SFXN1-203ENST00000502393 DDX10Q13206 875 aaKnown RBP26.09■■□□□ 1.77
SFXN1-203ENST00000502393 BRIP1Q9BX63 1249 aa26.09■■□□□ 1.77
SFXN1-203ENST00000502393 MIS18AQ9NYP9 233 aa26.09■■□□□ 1.77
SFXN1-203ENST00000502393 PDZRN3Q9UPQ7 1066 aa26.09■■□□□ 1.77
SFXN1-203ENST00000502393 DLG5Q8TDM6 1919 aa26.08■■□□□ 1.77
SFXN1-203ENST00000502393 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
SFXN1-203ENST00000502393 TTLL6Q8N841 843 aa26.08■■□□□ 1.77
SFXN1-203ENST00000502393 PDE6BP35913 854 aa26.07■■□□□ 1.76
SFXN1-203ENST00000502393 PRR5LQ6MZQ0 368 aa26.07■■□□□ 1.76
SFXN1-203ENST00000502393 DLEC1Q9Y238 1755 aa26.07■■□□□ 1.76
SFXN1-203ENST00000502393 BCORQ6W2J9 1755 aa26.06■■□□□ 1.76
SFXN1-203ENST00000502393 KIF3CO14782 793 aa26.06■■□□□ 1.76
SFXN1-203ENST00000502393 ZNF652Q9Y2D9 606 aa26.06■■□□□ 1.76
SFXN1-203ENST00000502393 NBPF26B4DH59 902 aa26.05■■□□□ 1.76
SFXN1-203ENST00000502393 RGL2O15211 777 aa26.05■■□□□ 1.76
SFXN1-203ENST00000502393 NBPF10Q6P3W6 841 aaKnown RBP26.05■■□□□ 1.76
SFXN1-203ENST00000502393 NBPF15Q8N660 670 aa26.05■■□□□ 1.76
SFXN1-203ENST00000502393 CNBD1Q8NA66 436 aa26.04■■□□□ 1.76
SFXN1-203ENST00000502393 RNF181Q9P0P0 153 aa26.04■■□□□ 1.76
SFXN1-203ENST00000502393 NPHP1O15259 732 aa26.03■■□□□ 1.76
SFXN1-203ENST00000502393 MYBBP1AQ9BQG0 1328 aaKnown RBP26.03■■□□□ 1.76
SFXN1-203ENST00000502393 EIF4A1P60842 406 aaKnown RBP26.02■■□□□ 1.76
SFXN1-203ENST00000502393 ST5P78524 1137 aa26.02■■□□□ 1.76
SFXN1-203ENST00000502393 THUMPD2Q9BTF0 503 aaKnown RBP26.02■■□□□ 1.76
SFXN1-203ENST00000502393 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
SFXN1-203ENST00000502393 CCDC24Q8N4L8 307 aa26.01■■□□□ 1.75
SFXN1-203ENST00000502393 ANKRD31Q8N7Z5 1873 aa26.01■■□□□ 1.75
SFXN1-203ENST00000502393 ZNF622Q969S3 477 aaKnown RBP eCLIP26■■□□□ 1.751e-6■□□□□ 10
SFXN1-203ENST00000502393 LAMB4A4D0S4 1761 aa26■■□□□ 1.75
SFXN1-203ENST00000502393 RIPK4P57078 832 aa25.99■■□□□ 1.75
SFXN1-203ENST00000502393 RASSF7Q02833 373 aa25.98■■□□□ 1.75
SFXN1-203ENST00000502393 NBPF5PQ86XG9 351 aaPredicted RBP25.98■■□□□ 1.75
SFXN1-203ENST00000502393 SBF1O95248 1867 aa25.98■■□□□ 1.75
SFXN1-203ENST00000502393 KDM2BQ8NHM5 1336 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms