RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 NARFQ9UHQ1 456 aa9.68□□□□□ -0.86
SH3RF1-202ENST00000502315 MRC1P22897 1456 aa9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 POLRMTO00411 1230 aaKnown RBP9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 RGL2O15211 777 aa9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 CYP19A1P11511 503 aaPredicted RBP9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 SMIM5Q71RC9 77 aa9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 AEBP1Q8IUX7 1158 aa9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
SH3RF1-202ENST00000502315 SCN11AQ9UI33 1791 aa9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 FKBP8Q14318 412 aa9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 GAS2L2Q8NHY3 880 aa9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 CCER1Q8TC90 406 aaPredicted RBP9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 MYH14Q7Z406 1995 aaKnown RBP9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
SH3RF1-202ENST00000502315 C9orf131Q5VYM1 1079 aa9.65□□□□□ -0.86
SH3RF1-202ENST00000502315 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
SH3RF1-202ENST00000502315 BRCA1P38398 1863 aaKnown RBP9.65□□□□□ -0.86
SH3RF1-202ENST00000502315 ADAMTS7Q9UKP4 1686 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 KIF7Q2M1P5 1343 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 DDR1Q08345 913 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 DNAJC10Q8IXB1 793 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 TTC5Q8N0Z6 440 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 DNAJC5GQ8N7S2 189 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 ZNF526Q8TF50 670 aaPredicted RBP9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
SH3RF1-202ENST00000502315 COL15A1P39059 1388 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 H0YIN7 160 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 PDE6BP35913 854 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 IL6STP40189 918 aaPredicted RBP9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
SH3RF1-202ENST00000502315 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 SERPINB2P05120 415 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 LMNB1P20700 586 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 TEFQ10587 303 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 NFIXQ14938 502 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 SRP68Q9UHB9 627 aaKnown RBP9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 TJP1Q07157 1748 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
SH3RF1-202ENST00000502315 GLTPD2A6NH11 291 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 DPY19L2Q6NUT2 758 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 FMNL2Q96PY5 1086 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 NUDCQ9Y266 331 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 ZBTB1Q9Y2K1 713 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 CEMIPQ8WUJ3 1361 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
SH3RF1-202ENST00000502315 LTBP3Q9NS15 1303 aa9.6□□□□□ -0.87
SH3RF1-202ENST00000502315 HMOX1P09601 288 aa9.6□□□□□ -0.87
SH3RF1-202ENST00000502315 SLC39A6Q13433 755 aa9.6□□□□□ -0.87
SH3RF1-202ENST00000502315 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
SH3RF1-202ENST00000502315 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 CNKSR1Q969H4 720 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 NMRK2Q9NPI5 230 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 CARMIL3Q8ND23 1372 aa9.59□□□□□ -0.87
SH3RF1-202ENST00000502315 UBR2Q8IWV8 1755 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 CHRNA5P30532 468 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 ZNF496Q96IT1 587 aaPredicted RBP9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 ZNF652Q9Y2D9 606 aa9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
SH3RF1-202ENST00000502315 CANXP27824 592 aaKnown RBP9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 CC2D1BQ5T0F9 858 aaKnown RBP9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 RTF1Q92541 710 aaKnown RBP9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 SBF1O95248 1867 aa9.57□□□□□ -0.88
SH3RF1-202ENST00000502315 DLEC1Q9Y238 1755 aa9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 KLRG2A4D1S0 409 aaPredicted RBP9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 U2SURPO15042 1029 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 SNRPA1P09661 255 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 ST5P78524 1137 aa9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 MASTLQ96GX5 879 aa9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-202ENST00000502315 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
SH3RF1-202ENST00000502315 PRR5LQ6MZQ0 368 aa9.55□□□□□ -0.88
SH3RF1-202ENST00000502315 SAMD1Q6SPF0 538 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms