RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 PAPPAQ13219 1627 aa23.13■■□□□ 1.29
PLXND1-202ENST00000501038 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
PLXND1-202ENST00000501038 BMP2KLQ5H9B9 411 aa23.12■■□□□ 1.29
PLXND1-202ENST00000501038 GLI3P10071 1580 aa23.12■■□□□ 1.29
PLXND1-202ENST00000501038 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
PLXND1-202ENST00000501038 FMNL2Q96PY5 1086 aa23.11■■□□□ 1.29
PLXND1-202ENST00000501038 LRRFIP2Q9Y608 721 aaKnown RBP23.11■■□□□ 1.29
PLXND1-202ENST00000501038 ERVV-2B6SEH9 535 aa23.11■■□□□ 1.29
PLXND1-202ENST00000501038 SNRPA1P09661 255 aaKnown RBP23.11■■□□□ 1.29
PLXND1-202ENST00000501038 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
PLXND1-202ENST00000501038 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
PLXND1-202ENST00000501038 BTG4Q9NY30 223 aa23.11■■□□□ 1.29
PLXND1-202ENST00000501038 PDIA6Q15084 440 aa23.1■■□□□ 1.29
PLXND1-202ENST00000501038 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
PLXND1-202ENST00000501038 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
PLXND1-202ENST00000501038 MAP3K2Q9Y2U5 619 aa23.09■■□□□ 1.29
PLXND1-202ENST00000501038 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
PLXND1-202ENST00000501038 PLEKHM2Q8IWE5 1019 aa23.08■■□□□ 1.29
PLXND1-202ENST00000501038 WNK3Q9BYP7 1800 aa23.08■■□□□ 1.28
PLXND1-202ENST00000501038 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.28
PLXND1-202ENST00000501038 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.28
PLXND1-202ENST00000501038 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
PLXND1-202ENST00000501038 PNMA6EA0A0J9YXQ4 647 aa23.06■■□□□ 1.28
PLXND1-202ENST00000501038 DDX54Q8TDD1 881 aaKnown RBP23.06■■□□□ 1.28
PLXND1-202ENST00000501038 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
PLXND1-202ENST00000501038 DISP2A7MBM2 1401 aa23.05■■□□□ 1.28
PLXND1-202ENST00000501038 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
PLXND1-202ENST00000501038 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
PLXND1-202ENST00000501038 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
PLXND1-202ENST00000501038 APBB1O00213 710 aa23.04■■□□□ 1.28
PLXND1-202ENST00000501038 C16orf71Q8IYS4 520 aaPredicted RBP23.04■■□□□ 1.28
PLXND1-202ENST00000501038 NBPF7P0C2Y1 421 aaPredicted RBP23.03■■□□□ 1.28
PLXND1-202ENST00000501038 AIMP1Q12904 312 aaKnown RBP23.03■■□□□ 1.28
PLXND1-202ENST00000501038 SSH3Q8TE77 659 aa23.03■■□□□ 1.28
PLXND1-202ENST00000501038 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
PLXND1-202ENST00000501038 POLA2Q14181 598 aa23.02■■□□□ 1.28
PLXND1-202ENST00000501038 TTC22Q5TAA0 569 aa23.02■■□□□ 1.28
PLXND1-202ENST00000501038 LINS1Q8NG48 757 aa23.02■■□□□ 1.28
PLXND1-202ENST00000501038 EXOC6BQ9Y2D4 811 aa23.02■■□□□ 1.28
PLXND1-202ENST00000501038 IBTKQ9P2D0 1353 aaPredicted RBP23.02■■□□□ 1.28
PLXND1-202ENST00000501038 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
PLXND1-202ENST00000501038 MYL6BP14649 208 aa23.01■■□□□ 1.27
PLXND1-202ENST00000501038 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
PLXND1-202ENST00000501038 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
PLXND1-202ENST00000501038 ERBB4Q15303 1308 aa23.01■■□□□ 1.27
PLXND1-202ENST00000501038 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
PLXND1-202ENST00000501038 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 RIC3Q7Z5B4 369 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 OTUD7AQ8TE49 926 aaPredicted RBP23■■□□□ 1.27
PLXND1-202ENST00000501038 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 GSPT1P15170 499 aaKnown RBP23■■□□□ 1.27
PLXND1-202ENST00000501038 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 ITGB4P16144 1822 aa23■■□□□ 1.27
PLXND1-202ENST00000501038 COPS6Q7L5N1 327 aa22.99■■□□□ 1.27
PLXND1-202ENST00000501038 C9orf78Q9NZ63 289 aaPredicted RBP22.99■■□□□ 1.27
PLXND1-202ENST00000501038 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
PLXND1-202ENST00000501038 LRP6O75581 1613 aa22.98■■□□□ 1.27
PLXND1-202ENST00000501038 UTYO14607 1347 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 CDC45O75419 566 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 CWF19L2Q2TBE0 894 aaKnown RBP22.97■■□□□ 1.27
PLXND1-202ENST00000501038 BCL11AQ9H165 835 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 TOM1O60784 492 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 RAB11FIP3O75154 756 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
PLXND1-202ENST00000501038 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 OSBPL3Q9H4L5 887 aa22.97■■□□□ 1.27
PLXND1-202ENST00000501038 DAXXQ9UER7 740 aaPredicted RBP22.97■■□□□ 1.27
PLXND1-202ENST00000501038 TUBGCP6Q96RT7 1819 aa22.96■■□□□ 1.27
PLXND1-202ENST00000501038 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
PLXND1-202ENST00000501038 MTX1Q13505 466 aa22.96■■□□□ 1.27
PLXND1-202ENST00000501038 TBC1D9Q6ZT07 1266 aa22.96■■□□□ 1.27
PLXND1-202ENST00000501038 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
PLXND1-202ENST00000501038 GRM8O00222 908 aa22.95■■□□□ 1.26
PLXND1-202ENST00000501038 SRGAP3O43295 1099 aa22.95■■□□□ 1.26
PLXND1-202ENST00000501038 ANKRD13DQ6ZTN6 518 aa22.95■■□□□ 1.26
PLXND1-202ENST00000501038 SALL3Q9BXA9 1300 aa22.94■■□□□ 1.26
PLXND1-202ENST00000501038 IGKV5-2P06315 115 aa22.94■■□□□ 1.26
PLXND1-202ENST00000501038 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
PLXND1-202ENST00000501038 PIP4K2AP48426 406 aaPredicted RBP22.93■■□□□ 1.26
PLXND1-202ENST00000501038 PDE1AP54750 535 aa22.93■■□□□ 1.26
PLXND1-202ENST00000501038 MYD88Q99836 296 aa22.93■■□□□ 1.26
PLXND1-202ENST00000501038 NUP188Q5SRE5 1749 aa22.93■■□□□ 1.26
PLXND1-202ENST00000501038 NEURL1BA8MQ27 555 aa22.93■■□□□ 1.26
PLXND1-202ENST00000501038 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
PLXND1-202ENST00000501038 SURF6O75683 361 aaKnown RBP22.93■■□□□ 1.26
PLXND1-202ENST00000501038 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
PLXND1-202ENST00000501038 HSP90AB4PQ58FF6 505 aa22.92■■□□□ 1.26
PLXND1-202ENST00000501038 NBPF26B4DH59 902 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 PIP4K2BP78356 416 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 NBPF14Q5TI25 921 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 NBPF10Q6P3W6 841 aaKnown RBP22.91■■□□□ 1.26
PLXND1-202ENST00000501038 NBPF15Q8N660 670 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 PLBD2Q8NHP8 589 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 SUCLG2Q96I99 432 aa22.91■■□□□ 1.26
PLXND1-202ENST00000501038 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
PLXND1-202ENST00000501038 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
PLXND1-202ENST00000501038 BECN1Q14457 450 aa22.9■■□□□ 1.26
PLXND1-202ENST00000501038 EXOC5O00471 708 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms