RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
HDLBP-247ENST00000498595 ZBTB1Q9Y2K1 713 aa19.34■□□□□ 0.69
HDLBP-247ENST00000498595 A0A087WZG4 1122 aa19.33■□□□□ 0.68
HDLBP-247ENST00000498595 CANXP27824 592 aaKnown RBP19.33■□□□□ 0.68
HDLBP-247ENST00000498595 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
HDLBP-247ENST00000498595 NARFQ9UHQ1 456 aa19.33■□□□□ 0.68
HDLBP-247ENST00000498595 NEFMP07197 916 aa19.32■□□□□ 0.68
HDLBP-247ENST00000498595 DDR1Q08345 913 aa19.32■□□□□ 0.68
HDLBP-247ENST00000498595 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
HDLBP-247ENST00000498595 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
HDLBP-247ENST00000498595 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
HDLBP-247ENST00000498595 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
HDLBP-247ENST00000498595 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
HDLBP-247ENST00000498595 ZNF496Q96IT1 587 aaPredicted RBP19.31■□□□□ 0.68
HDLBP-247ENST00000498595 PHACTR3Q96KR7 559 aa19.31■□□□□ 0.68
HDLBP-247ENST00000498595 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
HDLBP-247ENST00000498595 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
HDLBP-247ENST00000498595 POLRMTO00411 1230 aaKnown RBP19.3■□□□□ 0.68
HDLBP-247ENST00000498595 TM4SF1P30408 202 aa19.3■□□□□ 0.68
HDLBP-247ENST00000498595 ADCY9O60503 1353 aa19.3■□□□□ 0.68
HDLBP-247ENST00000498595 DALRD3Q5D0E6 543 aaKnown RBP19.29■□□□□ 0.68
HDLBP-247ENST00000498595 ZNF330Q9Y3S2 320 aaPredicted RBP19.29■□□□□ 0.68
HDLBP-247ENST00000498595 N4BP2Q86UW6 1770 aaPredicted RBP19.28■□□□□ 0.68
HDLBP-247ENST00000498595 CEMIPQ8WUJ3 1361 aa19.28■□□□□ 0.68
HDLBP-247ENST00000498595 NFIXQ14938 502 aa19.27■□□□□ 0.68
HDLBP-247ENST00000498595 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
HDLBP-247ENST00000498595 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.67
HDLBP-247ENST00000498595 EIF5P55010 431 aaKnown RBP19.26■□□□□ 0.67
HDLBP-247ENST00000498595 HTATSF1O43719 755 aaKnown RBP19.25■□□□□ 0.67
HDLBP-247ENST00000498595 SERPINB2P05120 415 aa19.25■□□□□ 0.67
HDLBP-247ENST00000498595 KCNA3P22001 575 aa19.25■□□□□ 0.67
HDLBP-247ENST00000498595 CHRNA5P30532 468 aa19.25■□□□□ 0.67
HDLBP-247ENST00000498595 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
HDLBP-247ENST00000498595 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-247ENST00000498595 BICDL1Q6ZP65 573 aa19.24■□□□□ 0.67
HDLBP-247ENST00000498595 MCM10Q7L590 875 aa19.24■□□□□ 0.67
HDLBP-247ENST00000498595 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
HDLBP-247ENST00000498595 NPHP1O15259 732 aa19.22■□□□□ 0.67
HDLBP-247ENST00000498595 BCL2L12Q9HB09 334 aa19.22■□□□□ 0.67
HDLBP-247ENST00000498595 H0YIN7 160 aa19.21■□□□□ 0.67
HDLBP-247ENST00000498595 KCNQ3O43525 872 aa19.21■□□□□ 0.67
HDLBP-247ENST00000498595 A1BGP04217 495 aa19.21■□□□□ 0.67
HDLBP-247ENST00000498595 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
HDLBP-247ENST00000498595 TBC1D2BQ9UPU7 963 aa19.21■□□□□ 0.67
HDLBP-247ENST00000498595 SIPA1L3O60292 1781 aaPredicted RBP19.2■□□□□ 0.66
HDLBP-247ENST00000498595 C9orf131Q5VYM1 1079 aa19.2■□□□□ 0.66
HDLBP-247ENST00000498595 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
HDLBP-247ENST00000498595 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
HDLBP-247ENST00000498595 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
HDLBP-247ENST00000498595 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
HDLBP-247ENST00000498595 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
HDLBP-247ENST00000498595 PDZRN3Q9UPQ7 1066 aa19.19■□□□□ 0.66
HDLBP-247ENST00000498595 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
HDLBP-247ENST00000498595 TBC1D9BQ66K14 1250 aa19.18■□□□□ 0.66
HDLBP-247ENST00000498595 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
HDLBP-247ENST00000498595 TTLL6Q8N841 843 aa19.18■□□□□ 0.66
HDLBP-247ENST00000498595 ZNF652Q9Y2D9 606 aa19.18■□□□□ 0.66
HDLBP-247ENST00000498595 PDE6BP35913 854 aa19.17■□□□□ 0.66
HDLBP-247ENST00000498595 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
HDLBP-247ENST00000498595 USP16Q9Y5T5 823 aa19.17■□□□□ 0.66
HDLBP-247ENST00000498595 BRCA1P38398 1863 aaKnown RBP19.16■□□□□ 0.66
HDLBP-247ENST00000498595 ST5P78524 1137 aa19.16■□□□□ 0.66
HDLBP-247ENST00000498595 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
HDLBP-247ENST00000498595 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
HDLBP-247ENST00000498595 CAMTA2O94983 1202 aa19.15■□□□□ 0.66
HDLBP-247ENST00000498595 RALBP1Q15311 655 aa19.15■□□□□ 0.66
HDLBP-247ENST00000498595 BRIP1Q9BX63 1249 aa19.15■□□□□ 0.66
HDLBP-247ENST00000498595 ARFGEF1Q9Y6D6 1849 aa19.15■□□□□ 0.66
HDLBP-247ENST00000498595 KDM2BQ8NHM5 1336 aa19.15■□□□□ 0.66
HDLBP-247ENST00000498595 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.66
HDLBP-247ENST00000498595 KIF3CO14782 793 aa19.14■□□□□ 0.65
HDLBP-247ENST00000498595 NFE2L2Q16236 605 aa19.14■□□□□ 0.65
HDLBP-247ENST00000498595 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
HDLBP-247ENST00000498595 ZNF622Q969S3 477 aaKnown RBP eCLIP19.14■□□□□ 0.653e-9■■□□□ 12.9
HDLBP-247ENST00000498595 SCN7AQ01118 1682 aa19.14■□□□□ 0.65
HDLBP-247ENST00000498595 HSPA6P17066 643 aa19.13■□□□□ 0.65
HDLBP-247ENST00000498595 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
HDLBP-247ENST00000498595 PRR5LQ6MZQ0 368 aa19.13■□□□□ 0.65
HDLBP-247ENST00000498595 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
HDLBP-247ENST00000498595 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
HDLBP-247ENST00000498595 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
HDLBP-247ENST00000498595 TOMM70O94826 608 aa19.12■□□□□ 0.65
HDLBP-247ENST00000498595 LMNB1P20700 586 aa19.11■□□□□ 0.65
HDLBP-247ENST00000498595 MIS18AQ9NYP9 233 aa19.11■□□□□ 0.65
HDLBP-247ENST00000498595 ZC3H4Q9UPT8 1303 aaKnown RBP19.1■□□□□ 0.65
HDLBP-247ENST00000498595 NBPF5PQ86XG9 351 aaPredicted RBP19.1■□□□□ 0.65
HDLBP-247ENST00000498595 CCDC24Q8N4L8 307 aa19.1■□□□□ 0.65
HDLBP-247ENST00000498595 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
HDLBP-247ENST00000498595 NMRK2Q9NPI5 230 aa19.1■□□□□ 0.65
HDLBP-247ENST00000498595 RGL2O15211 777 aa19.09■□□□□ 0.65
HDLBP-247ENST00000498595 RASSF7Q02833 373 aa19.09■□□□□ 0.65
HDLBP-247ENST00000498595 CNKSR1Q969H4 720 aa19.09■□□□□ 0.65
HDLBP-247ENST00000498595 DDX10Q13206 875 aaKnown RBP19.08■□□□□ 0.64
HDLBP-247ENST00000498595 NIP7Q9Y221 180 aaKnown RBP eCLIP19.08■□□□□ 0.64
HDLBP-247ENST00000498595 NBPF26B4DH59 902 aa19.07■□□□□ 0.64
HDLBP-247ENST00000498595 NBPF10Q6P3W6 841 aaKnown RBP19.07■□□□□ 0.64
HDLBP-247ENST00000498595 TPTE2Q6XPS3 522 aa19.07■□□□□ 0.64
HDLBP-247ENST00000498595 NBPF15Q8N660 670 aa19.07■□□□□ 0.64
HDLBP-247ENST00000498595 C21orf2O43822 256 aa19.06■□□□□ 0.64
HDLBP-247ENST00000498595 GTF2E1P29083 439 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms