RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 SRA1Q9HD15 236 aaKnown RBP9.3□□□□□ -0.92
NEB-216ENST00000497809 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
NEB-216ENST00000497809 NR1H3Q13133 447 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 DSC3Q14574 896 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 SLF2Q8IX21 1173 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 SRPK1Q96SB4 655 aaKnown RBP9.3□□□□□ -0.92
NEB-216ENST00000497809 IFRD1O00458 451 aaPredicted RBP9.29□□□□□ -0.92
NEB-216ENST00000497809 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
NEB-216ENST00000497809 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
NEB-216ENST00000497809 ZNF654Q8IZM8 581 aa9.29□□□□□ -0.92
NEB-216ENST00000497809 TTC13Q8NBP0 860 aa9.29□□□□□ -0.92
NEB-216ENST00000497809 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
NEB-216ENST00000497809 AVENQ9NQS1 362 aaPredicted RBP9.29□□□□□ -0.92
NEB-216ENST00000497809 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
NEB-216ENST00000497809 RGS20O76081 388 aa9.28□□□□□ -0.92
NEB-216ENST00000497809 CDC45O75419 566 aa9.28□□□□□ -0.92
NEB-216ENST00000497809 FDX1P10109 184 aa9.28□□□□□ -0.92
NEB-216ENST00000497809 FTSJ3Q8IY81 847 aaKnown RBP9.28□□□□□ -0.92
NEB-216ENST00000497809 PAGR1Q9BTK6 254 aa9.28□□□□□ -0.92
NEB-216ENST00000497809 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
NEB-216ENST00000497809 NAP1L4Q99733 375 aaKnown RBP9.27□□□□□ -0.93
NEB-216ENST00000497809 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
NEB-216ENST00000497809 HOMER2Q9NSB8 354 aa9.27□□□□□ -0.93
NEB-216ENST00000497809 RCCD1A6NED2 376 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 PHF14O94880 888 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 CTSHP09668 335 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
NEB-216ENST00000497809 CDKN1CP49918 316 aaPredicted RBP9.26□□□□□ -0.93
NEB-216ENST00000497809 EHHADHQ08426 723 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 FAM126AQ9BYI3 521 aaPredicted RBP9.26□□□□□ -0.93
NEB-216ENST00000497809 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 GJA8P48165 433 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 LRRC41Q15345 812 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 PURBQ96QR8 312 aaKnown RBP9.26□□□□□ -0.93
NEB-216ENST00000497809 SLKQ9H2G2 1235 aaPredicted RBP9.26□□□□□ -0.93
NEB-216ENST00000497809 SNTG2Q9NY99 539 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 SCINQ9Y6U3 715 aa9.26□□□□□ -0.93
NEB-216ENST00000497809 PER1O15534 1290 aaPredicted RBP9.25□□□□□ -0.93
NEB-216ENST00000497809 NRDCO43847 1150 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 POU5F1BQ06416 359 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 JAMLQ86YT9 394 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 C1orf131Q8NDD1 294 aaKnown RBP9.25□□□□□ -0.93
NEB-216ENST00000497809 SH3TC2Q8TF17 1288 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 MKL1Q969V6 931 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 CEP89Q96ST8 783 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 ARNT2Q9HBZ2 717 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 CASS4Q9NQ75 786 aa9.25□□□□□ -0.93
NEB-216ENST00000497809 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
NEB-216ENST00000497809 FOSP01100 380 aaPredicted RBP9.24□□□□□ -0.93
NEB-216ENST00000497809 IGHA2P01877 340 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 MASP1P48740 699 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 BRDTQ58F21 947 aaPredicted RBP9.24□□□□□ -0.93
NEB-216ENST00000497809 C10orf62Q5T681 223 aaPredicted RBP9.24□□□□□ -0.93
NEB-216ENST00000497809 CXorf38Q8TB03 319 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 KIF3BO15066 747 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 ANP32CO43423 234 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 BPNT1O95861 308 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 MTMR2Q13614 643 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 RELTQ969Z4 430 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 CNTN3Q9P232 1028 aa9.24□□□□□ -0.93
NEB-216ENST00000497809 TSPAN6O43657 245 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 PLIN1O60240 522 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 FAM163BP0C2L3 166 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 CHMP4BP1P59074 171 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 RASA3Q14644 834 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 EFCAB2Q5VUJ9 269 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 SULF1Q8IWU6 871 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 SAMD3Q8N6K7 520 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 NEUROD6Q96NK8 337 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 DNAAF2Q9NVR5 837 aaKnown RBP9.23□□□□□ -0.93
NEB-216ENST00000497809 ERBB3P21860 1342 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 ESYT3A0FGR9 886 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 COPB2P35606 906 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 NFE2Q16621 373 aaPredicted RBP9.23□□□□□ -0.93
NEB-216ENST00000497809 KIAA0907Q7Z7F0 614 aaPredicted RBP9.23□□□□□ -0.93
NEB-216ENST00000497809 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
NEB-216ENST00000497809 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.23□□□□□ -0.93
NEB-216ENST00000497809 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
NEB-216ENST00000497809 NR1I2O75469 434 aa9.22□□□□□ -0.93
NEB-216ENST00000497809 MMRN1Q13201 1228 aa9.22□□□□□ -0.93
NEB-216ENST00000497809 VPS72Q15906 364 aa9.22□□□□□ -0.93
NEB-216ENST00000497809 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
NEB-216ENST00000497809 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
NEB-216ENST00000497809 RPGRIP1LQ68CZ1 1315 aa9.21□□□□□ -0.93
NEB-216ENST00000497809 CAND2O75155 1236 aa9.21□□□□□ -0.93
NEB-216ENST00000497809 NOS2P35228 1153 aa9.21□□□□□ -0.93
NEB-216ENST00000497809 EXOSC10Q01780 885 aaKnown RBP9.21□□□□□ -0.93
NEB-216ENST00000497809 PLCB3Q01970 1234 aa9.21□□□□□ -0.93
NEB-216ENST00000497809 PAK2Q13177 524 aa9.21□□□□□ -0.93
NEB-216ENST00000497809 FKBP5Q13451 457 aaPredicted RBP9.21□□□□□ -0.93
NEB-216ENST00000497809 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms