RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 SBF1O95248 1867 aa29.56■■■□□ 2.32
CLIC4-204ENST00000497755 ZBTB1Q9Y2K1 713 aa29.55■■■□□ 2.32
CLIC4-204ENST00000497755 MRC1P22897 1456 aa29.55■■■□□ 2.32
CLIC4-204ENST00000497755 KDM2BQ8NHM5 1336 aa29.54■■■□□ 2.32
CLIC4-204ENST00000497755 C16orf71Q8IYS4 520 aaPredicted RBP29.54■■■□□ 2.32
CLIC4-204ENST00000497755 BCL2L12Q9HB09 334 aa29.54■■■□□ 2.32
CLIC4-204ENST00000497755 KCPQ6ZWJ8 1503 aa29.54■■■□□ 2.32
CLIC4-204ENST00000497755 VIRMAQ69YN4 1812 aaKnown RBP29.53■■■□□ 2.32
CLIC4-204ENST00000497755 RRAGCQ9HB90 399 aa29.53■■■□□ 2.32
CLIC4-204ENST00000497755 AFDNP55196 1824 aaKnown RBP29.52■■■□□ 2.32
CLIC4-204ENST00000497755 VSIG10Q8N0Z9 540 aa29.52■■■□□ 2.32
CLIC4-204ENST00000497755 COL15A1P39059 1388 aa29.52■■■□□ 2.32
CLIC4-204ENST00000497755 KIF7Q2M1P5 1343 aa29.51■■■□□ 2.32
CLIC4-204ENST00000497755 PER1O15534 1290 aaPredicted RBP29.51■■■□□ 2.31
CLIC4-204ENST00000497755 SERPINB2P05120 415 aa29.5■■■□□ 2.31
CLIC4-204ENST00000497755 FSTL1Q12841 308 aa29.5■■■□□ 2.31
CLIC4-204ENST00000497755 CCER1Q8TC90 406 aaPredicted RBP29.5■■■□□ 2.31
CLIC4-204ENST00000497755 DIAPH1O60610 1272 aaKnown RBP29.49■■■□□ 2.31
CLIC4-204ENST00000497755 HTRA3P83110 453 aa29.49■■■□□ 2.31
CLIC4-204ENST00000497755 RASSF7Q02833 373 aa29.48■■■□□ 2.31
CLIC4-204ENST00000497755 NRXN2Q9P2S2 1712 aa29.48■■■□□ 2.31
CLIC4-204ENST00000497755 CANXP27824 592 aaKnown RBP29.47■■■□□ 2.31
CLIC4-204ENST00000497755 WDR90Q96KV7 1748 aa29.46■■■□□ 2.31
CLIC4-204ENST00000497755 PRELPP51888 382 aa29.45■■■□□ 2.31
CLIC4-204ENST00000497755 CC2D1BQ5T0F9 858 aaKnown RBP29.45■■■□□ 2.31
CLIC4-204ENST00000497755 EIF5P55010 431 aaKnown RBP29.44■■■□□ 2.3
CLIC4-204ENST00000497755 TTLL6Q8N841 843 aa29.44■■■□□ 2.3
CLIC4-204ENST00000497755 PCNTO95613 3336 aa29.43■■■□□ 2.3
CLIC4-204ENST00000497755 C2CD5Q86YS7 1000 aa29.43■■■□□ 2.3
CLIC4-204ENST00000497755 KLRG1Q96E93 195 aa29.43■■■□□ 2.3
CLIC4-204ENST00000497755 UBR2Q8IWV8 1755 aa29.42■■■□□ 2.3
CLIC4-204ENST00000497755 STARD3NLO95772 234 aa29.42■■■□□ 2.3
CLIC4-204ENST00000497755 LMNB1P20700 586 aa29.42■■■□□ 2.3
CLIC4-204ENST00000497755 ZC3H4Q9UPT8 1303 aaKnown RBP29.42■■■□□ 2.3
CLIC4-204ENST00000497755 BICDL1Q6ZP65 573 aa29.41■■■□□ 2.3
CLIC4-204ENST00000497755 TTC5Q8N0Z6 440 aa29.41■■■□□ 2.3
CLIC4-204ENST00000497755 IL17REQ8NFR9 667 aa29.41■■■□□ 2.3
CLIC4-204ENST00000497755 TNRC6CQ9HCJ0 1690 aaKnown RBP29.4■■■□□ 2.3
CLIC4-204ENST00000497755 CARMIL3Q8ND23 1372 aa29.4■■■□□ 2.3
CLIC4-204ENST00000497755 DLEC1Q9Y238 1755 aa29.4■■■□□ 2.3
CLIC4-204ENST00000497755 H0YIN7 160 aa29.4■■■□□ 2.3
CLIC4-204ENST00000497755 ZNF496Q96IT1 587 aaPredicted RBP29.4■■■□□ 2.3
CLIC4-204ENST00000497755 JMYQ8N9B5 988 aa29.39■■■□□ 2.3
CLIC4-204ENST00000497755 A0A087WZG4 1122 aa29.38■■■□□ 2.29
CLIC4-204ENST00000497755 GLTPD2A6NH11 291 aa29.38■■■□□ 2.29
CLIC4-204ENST00000497755 SMC1BQ8NDV3 1235 aa29.38■■■□□ 2.29
CLIC4-204ENST00000497755 TBC1D9BQ66K14 1250 aa29.37■■■□□ 2.29
CLIC4-204ENST00000497755 ZNF790Q6PG37 636 aa29.37■■■□□ 2.29
CLIC4-204ENST00000497755 CCDC88AQ3V6T2 1871 aa29.36■■■□□ 2.29
CLIC4-204ENST00000497755 GNAT3A8MTJ3 354 aa29.36■■■□□ 2.29
CLIC4-204ENST00000497755 NFKBIEO00221 500 aa29.36■■■□□ 2.29
CLIC4-204ENST00000497755 VEGFAP15692 232 aaPredicted RBP29.35■■■□□ 2.29
CLIC4-204ENST00000497755 TEFQ10587 303 aa29.35■■■□□ 2.29
CLIC4-204ENST00000497755 TEX13AQ9BXU3 409 aaPredicted RBP29.35■■■□□ 2.29
CLIC4-204ENST00000497755 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
CLIC4-204ENST00000497755 U2SURPO15042 1029 aaKnown RBP29.34■■■□□ 2.29
CLIC4-204ENST00000497755 GAS2L2Q8NHY3 880 aa29.34■■■□□ 2.29
CLIC4-204ENST00000497755 TBC1D2BQ9UPU7 963 aa29.34■■■□□ 2.29
CLIC4-204ENST00000497755 COL3A1P02461 1466 aaPredicted RBP29.34■■■□□ 2.29
CLIC4-204ENST00000497755 BRIP1Q9BX63 1249 aa29.33■■■□□ 2.29
CLIC4-204ENST00000497755 IL6STP40189 918 aaPredicted RBP29.31■■■□□ 2.28
CLIC4-204ENST00000497755 CNGB1Q14028 1251 aaPredicted RBP29.31■■■□□ 2.28
CLIC4-204ENST00000497755 PRR5LQ6MZQ0 368 aa29.31■■■□□ 2.28
CLIC4-204ENST00000497755 CCDC24Q8N4L8 307 aa29.31■■■□□ 2.28
CLIC4-204ENST00000497755 ZNF622Q969S3 477 aaKnown RBP eCLIP29.31■■■□□ 2.28
CLIC4-204ENST00000497755 ANKRD31Q8N7Z5 1873 aa29.31■■■□□ 2.28
CLIC4-204ENST00000497755 NPC1L1Q9UHC9 1359 aa29.3■■■□□ 2.28
CLIC4-204ENST00000497755 A1BGP04217 495 aa29.3■■■□□ 2.28
CLIC4-204ENST00000497755 PDE6BP35913 854 aa29.3■■■□□ 2.28
CLIC4-204ENST00000497755 PDZRN3Q9UPQ7 1066 aa29.3■■■□□ 2.28
CLIC4-204ENST00000497755 ZNF330Q9Y3S2 320 aaPredicted RBP29.3■■■□□ 2.28
CLIC4-204ENST00000497755 POTECB2RU33 542 aa29.29■■■□□ 2.28
CLIC4-204ENST00000497755 SIPA1L3O60292 1781 aaPredicted RBP29.29■■■□□ 2.28
CLIC4-204ENST00000497755 C21orf2O43822 256 aa29.28■■■□□ 2.28
CLIC4-204ENST00000497755 FMNL2Q96PY5 1086 aa29.28■■■□□ 2.28
CLIC4-204ENST00000497755 KCNQ3O43525 872 aa29.27■■■□□ 2.28
CLIC4-204ENST00000497755 COL13A1Q5TAT6 717 aaPredicted RBP29.27■■■□□ 2.28
CLIC4-204ENST00000497755 PHACTR3Q96KR7 559 aa29.27■■■□□ 2.28
CLIC4-204ENST00000497755 ZNF219Q9P2Y4 722 aaPredicted RBP29.27■■■□□ 2.28
CLIC4-204ENST00000497755 CEMIPQ8WUJ3 1361 aa29.26■■■□□ 2.27
CLIC4-204ENST00000497755 CAMTA2O94983 1202 aa29.25■■■□□ 2.27
CLIC4-204ENST00000497755 SETDB2Q96T68 719 aa29.25■■■□□ 2.27
CLIC4-204ENST00000497755 TIAM2Q8IVF5 1701 aa29.25■■■□□ 2.27
CLIC4-204ENST00000497755 DPY19L2Q6NUT2 758 aa29.24■■■□□ 2.27
CLIC4-204ENST00000497755 SCN7AQ01118 1682 aa29.24■■■□□ 2.27
CLIC4-204ENST00000497755 BTBD11A6QL63 1104 aa29.23■■■□□ 2.27
CLIC4-204ENST00000497755 FER1L6Q2WGJ9 1857 aa29.23■■■□□ 2.27
CLIC4-204ENST00000497755 ERFEQ4G0M1 354 aa29.22■■■□□ 2.27
CLIC4-204ENST00000497755 USP16Q9Y5T5 823 aa29.22■■■□□ 2.27
CLIC4-204ENST00000497755 COL11A2P13942 1736 aaPredicted RBP29.21■■■□□ 2.27
CLIC4-204ENST00000497755 PRKAR2BP31323 418 aa29.21■■■□□ 2.27
CLIC4-204ENST00000497755 NPM2Q86SE8 214 aaKnown RBP29.21■■■□□ 2.27
CLIC4-204ENST00000497755 CNBD1Q8NA66 436 aa29.21■■■□□ 2.27
CLIC4-204ENST00000497755 DICER1Q9UPY3 1922 aaKnown RBP29.21■■■□□ 2.27
CLIC4-204ENST00000497755 DZIP3Q86Y13 1208 aaKnown RBP29.2■■■□□ 2.26
CLIC4-204ENST00000497755 RSPH6AQ9H0K4 717 aa29.2■■■□□ 2.26
CLIC4-204ENST00000497755 SRGNP10124 158 aa29.19■■■□□ 2.26
CLIC4-204ENST00000497755 STYK1Q6J9G0 422 aa29.19■■■□□ 2.26
CLIC4-204ENST00000497755 CNKSR1Q969H4 720 aa29.19■■■□□ 2.26
CLIC4-204ENST00000497755 SLX4Q8IY92 1834 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms