RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SMC4Q9NTJ3 1288 aa10.89□□□□□ -0.67
HPS4-217ENST00000496385 A0A1W2PP64 1363 aa10.89□□□□□ -0.67
HPS4-217ENST00000496385 SOX12O15370 315 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 BRD2P25440 801 aaKnown RBP10.88□□□□□ -0.67
HPS4-217ENST00000496385 CD163L1Q9NR16 1453 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 AHDC1Q5TGY3 1603 aaPredicted RBP10.88□□□□□ -0.67
HPS4-217ENST00000496385 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 RNF20Q5VTR2 975 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 TMEM87AQ8NBN3 555 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 INTS4Q96HW7 963 aaKnown RBP10.88□□□□□ -0.67
HPS4-217ENST00000496385 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
HPS4-217ENST00000496385 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
HPS4-217ENST00000496385 IL16Q14005 1332 aa10.87□□□□□ -0.67
HPS4-217ENST00000496385 CYP2C19P33261 490 aa10.87□□□□□ -0.67
HPS4-217ENST00000496385 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
HPS4-217ENST00000496385 LRRC59Q96AG4 307 aaKnown RBP10.87□□□□□ -0.67
HPS4-217ENST00000496385 REC8O95072 547 aa10.87□□□□□ -0.67
HPS4-217ENST00000496385 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
HPS4-217ENST00000496385 AXDND1Q5T1B0 1012 aaPredicted RBP10.87□□□□□ -0.67
HPS4-217ENST00000496385 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
HPS4-217ENST00000496385 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
HPS4-217ENST00000496385 ZNF428Q96B54 188 aa10.87□□□□□ -0.67
HPS4-217ENST00000496385 ALDH1L2Q3SY69 923 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 ANKRD45Q5TZF3 282 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 NME9Q86XW9 330 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 TMEM57Q8N5G2 664 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 CLGNO14967 610 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 MX1P20591 662 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 USP6P35125 1406 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 C17orf53Q8N3J3 647 aaPredicted RBP10.86□□□□□ -0.67
HPS4-217ENST00000496385 ZGPATQ8N5A5 531 aaKnown RBP10.86□□□□□ -0.67
HPS4-217ENST00000496385 CCDC112Q8NEF3 446 aa10.86□□□□□ -0.67
HPS4-217ENST00000496385 SECISBP2LQ93073 1101 aaKnown RBP10.86□□□□□ -0.67
HPS4-217ENST00000496385 MUM1L1Q5H9M0 696 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 CASC1Q6TDU7 716 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 CUL4AQ13619 759 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 KCNF1Q9H3M0 494 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 RAD50Q92878 1312 aa10.85□□□□□ -0.67
HPS4-217ENST00000496385 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
HPS4-217ENST00000496385 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
HPS4-217ENST00000496385 SSH1Q8WYL5 1049 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 CFAP53Q96M91 514 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 NOB1Q9ULX3 412 aaKnown RBP10.84□□□□□ -0.67
HPS4-217ENST00000496385 PNPLA6Q8IY17 1366 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 TTC21BQ7Z4L5 1316 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 FBLN1P23142 703 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 NLRP6P59044 892 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 TRPM3Q9HCF6 1732 aaPredicted RBP10.84□□□□□ -0.67
HPS4-217ENST00000496385 AKAP12Q02952 1782 aa10.84□□□□□ -0.67
HPS4-217ENST00000496385 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
HPS4-217ENST00000496385 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.68
HPS4-217ENST00000496385 GGNBP2Q9H3C7 697 aa10.83□□□□□ -0.68
HPS4-217ENST00000496385 JCADQ9P266 1359 aa10.83□□□□□ -0.68
HPS4-217ENST00000496385 PUS7Q96PZ0 661 aaKnown RBP10.83□□□□□ -0.68
HPS4-217ENST00000496385 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
HPS4-217ENST00000496385 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.83□□□□□ -0.68
HPS4-217ENST00000496385 NSD3Q9BZ95 1437 aa10.83□□□□□ -0.68
HPS4-217ENST00000496385 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 BRMS1Q9HCU9 246 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 TNNT1P13805 278 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 HNRNPH2P55795 449 aaKnown RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 RASSF4Q9H2L5 321 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 WDR33Q9C0J8 1336 aaKnown RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 HTATSF1O43719 755 aaKnown RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 ZC3H6P61129 1189 aaKnown RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 TEX35Q5T0J7 233 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 ERO1AQ96HE7 468 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 FUCA2Q9BTY2 467 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 CHMP4AQ9BY43 222 aa10.82□□□□□ -0.68
HPS4-217ENST00000496385 RNF216Q9NWF9 866 aaPredicted RBP10.82□□□□□ -0.68
HPS4-217ENST00000496385 SBNO1A3KN83 1393 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 MON2Q7Z3U7 1717 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 HCLS1P14317 486 aaPredicted RBP10.81□□□□□ -0.68
HPS4-217ENST00000496385 EXOSC9Q06265 439 aaKnown RBP10.81□□□□□ -0.68
HPS4-217ENST00000496385 RAD51AP2Q09MP3 1159 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 TTC22Q5TAA0 569 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.81□□□□□ -0.68
HPS4-217ENST00000496385 LRP6O75581 1613 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 UBE2HP62256 183 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
HPS4-217ENST00000496385 SSH2Q76I76 1423 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 PIK3C2AO00443 1686 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 ALS2Q96Q42 1657 aa10.8□□□□□ -0.68
HPS4-217ENST00000496385 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
HPS4-217ENST00000496385 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
HPS4-217ENST00000496385 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms