RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 NACAP1Q9BZK3 213 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 USP6P35125 1406 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 RBM6P78332 1123 aaKnown RBP13.25□□□□□ -0.29
NECAP2-207ENST00000496239 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
NECAP2-207ENST00000496239 INSRP06213 1382 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 A1BGP04217 495 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 SLC5A1P13866 664 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
NECAP2-207ENST00000496239 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 HIP1O00291 1037 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
NECAP2-207ENST00000496239 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
NECAP2-207ENST00000496239 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
NECAP2-207ENST00000496239 PHKG2P15735 406 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
NECAP2-207ENST00000496239 TCEAL9Q9UHQ7 104 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
NECAP2-207ENST00000496239 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 ERBB3P21860 1342 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 ADGRB3O60242 1522 aa13.23□□□□□ -0.29
NECAP2-207ENST00000496239 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
NECAP2-207ENST00000496239 TTLL12Q14166 644 aaPredicted RBP13.22□□□□□ -0.29
NECAP2-207ENST00000496239 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
NECAP2-207ENST00000496239 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
NECAP2-207ENST00000496239 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
NECAP2-207ENST00000496239 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 H3BQV1 296 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
NECAP2-207ENST00000496239 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
NECAP2-207ENST00000496239 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 MAP4K4O95819 1239 aaPredicted RBP13.21□□□□□ -0.29
NECAP2-207ENST00000496239 TRIM27P14373 513 aa13.21□□□□□ -0.29
NECAP2-207ENST00000496239 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.29
NECAP2-207ENST00000496239 CDC45O75419 566 aa13.21□□□□□ -0.3
NECAP2-207ENST00000496239 TRIM29Q14134 588 aa13.21□□□□□ -0.3
NECAP2-207ENST00000496239 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 SYNMO15061 1565 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
NECAP2-207ENST00000496239 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
NECAP2-207ENST00000496239 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
NECAP2-207ENST00000496239 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
NECAP2-207ENST00000496239 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 GRM8O00222 908 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 TDO2P48775 406 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 SIK1P57059 783 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
NECAP2-207ENST00000496239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
NECAP2-207ENST00000496239 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 AIDAQ96BJ3 306 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
NECAP2-207ENST00000496239 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
NECAP2-207ENST00000496239 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
NECAP2-207ENST00000496239 SPATA31A6Q5VVP1 1343 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 USP5P45974 858 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
NECAP2-207ENST00000496239 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
NECAP2-207ENST00000496239 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 CCDC24Q8N4L8 307 aa13.18□□□□□ -0.3
NECAP2-207ENST00000496239 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 INO80Q9ULG1 1556 aaPredicted RBP13.17□□□□□ -0.3
NECAP2-207ENST00000496239 ATP7BP35670 1465 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 GPR162Q16538 588 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
NECAP2-207ENST00000496239 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
NECAP2-207ENST00000496239 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 CEP152O94986 1710 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
NECAP2-207ENST00000496239 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 H0YIN7 160 aa13.17□□□□□ -0.3
NECAP2-207ENST00000496239 PDE4AP27815 886 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms