RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 MYOM2P54296 1465 aa6.52□□□□□ -1.37
VPS52-222ENST00000495981 GLI3P10071 1580 aa6.52□□□□□ -1.37
VPS52-222ENST00000495981 C6orf229H3BNL8 230 aa6.51□□□□□ -1.37
VPS52-222ENST00000495981 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
VPS52-222ENST00000495981 KRT27Q7Z3Y8 459 aa6.51□□□□□ -1.37
VPS52-222ENST00000495981 ZMIZ1Q9ULJ6 1067 aa6.51□□□□□ -1.37
VPS52-222ENST00000495981 GNEQ9Y223 722 aaKnown RBP6.51□□□□□ -1.37
VPS52-222ENST00000495981 IFT172Q9UG01 1749 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 PIK3R4Q99570 1358 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 ATP9BO43861 1147 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 IGSF3O75054 1194 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 BAG6P46379 1132 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 CCDC27Q2M243 656 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 PHLDB3Q6NSJ2 640 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 HS3ST6Q96QI5 342 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 CAMKK2Q96RR4 588 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 SEPT9Q9UHD8 586 aaPredicted RBP6.5□□□□□ -1.37
VPS52-222ENST00000495981 GOLGB1Q14789 3259 aaKnown RBP6.5□□□□□ -1.37
VPS52-222ENST00000495981 ADGRL3Q9HAR2 1447 aa6.5□□□□□ -1.37
VPS52-222ENST00000495981 PPLO60437 1756 aa6.49□□□□□ -1.37
VPS52-222ENST00000495981 METP08581 1390 aa6.49□□□□□ -1.37
VPS52-222ENST00000495981 VARS2Q5ST30 1063 aaKnown RBP6.49□□□□□ -1.37
VPS52-222ENST00000495981 POTEEQ6S8J3 1075 aa6.49□□□□□ -1.37
VPS52-222ENST00000495981 CHIC2Q9UKJ5 165 aa6.49□□□□□ -1.37
VPS52-222ENST00000495981 COL22A1Q8NFW1 1626 aaPredicted RBP6.49□□□□□ -1.37
VPS52-222ENST00000495981 CDC42BPGQ6DT37 1551 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 KNDC1Q76NI1 1749 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 POTEB3A0JP26 581 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 CFHP08603 1231 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 SEMA3FQ13275 785 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 ELOAQ14241 798 aaKnown RBP6.48□□□□□ -1.37
VPS52-222ENST00000495981 POTEBQ6S5H4 581 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 STK32AQ8WU08 396 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
VPS52-222ENST00000495981 SLC52A1Q9NWF4 448 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 SLIT2O94813 1529 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 KIF1BO60333 1816 aa6.48□□□□□ -1.37
VPS52-222ENST00000495981 FBXO45P0C2W1 286 aa6.47□□□□□ -1.37
VPS52-222ENST00000495981 PSEN2P49810 448 aa6.47□□□□□ -1.37
VPS52-222ENST00000495981 VPS72Q15906 364 aa6.47□□□□□ -1.37
VPS52-222ENST00000495981 TMEM164Q5U3C3 297 aa6.47□□□□□ -1.37
VPS52-222ENST00000495981 RABGEF1Q9UJ41 708 aa6.47□□□□□ -1.37
VPS52-222ENST00000495981 RRBP1Q9P2E9 1410 aaKnown RBP6.47□□□□□ -1.37
VPS52-222ENST00000495981 UNCXA6NJT0 531 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 ATP6V1AP38606 617 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 NR1H3Q13133 447 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 FAM98CQ17RN3 349 aaKnown RBP6.46□□□□□ -1.38
VPS52-222ENST00000495981 RETREG3Q86VR2 466 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 CDAN1Q8IWY9 1227 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 ABCA3Q99758 1704 aa6.46□□□□□ -1.38
VPS52-222ENST00000495981 MARF1Q9Y4F3 1742 aaKnown RBP6.46□□□□□ -1.38
VPS52-222ENST00000495981 NAIPQ13075 1403 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 E9PSI1 815 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 FOXO3O43524 673 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 KCNQ2O43526 872 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 FAM50AQ14320 339 aaKnown RBP6.45□□□□□ -1.38
VPS52-222ENST00000495981 MORN1Q5T089 497 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 DESI1Q6ICB0 168 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 SAMD7Q7Z3H4 446 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 FAM174AQ8TBP5 190 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 SLC4A5Q9BY07 1137 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 PCDH10Q9P2E7 1040 aa6.45□□□□□ -1.38
VPS52-222ENST00000495981 DISP2A7MBM2 1401 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 FAM83GA6ND36 823 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 TRIM37O94972 964 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.381e-12■■■■□ 25
VPS52-222ENST00000495981 GRIPAP1Q4V328 841 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 NOM1Q5C9Z4 860 aaKnown RBP6.44□□□□□ -1.38
VPS52-222ENST00000495981 DMRTA1Q5VZB9 504 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 LYPD8Q6UX82 237 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 ZNF687Q8N1G0 1237 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 NFATC2IPQ8NCF5 419 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS52-222ENST00000495981 SPON1Q9HCB6 807 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 SLC27A5Q9Y2P5 690 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 CAMTA1Q9Y6Y1 1673 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.44□□□□□ -1.38
VPS52-222ENST00000495981 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
VPS52-222ENST00000495981 BRWD3Q6RI45 1802 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 HFM1A2PYH4 1435 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 PXDNQ92626 1479 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 FMN2Q9NZ56 1722 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 PPP1R1BQ9UD71 204 aaPredicted RBP6.43□□□□□ -1.38
VPS52-222ENST00000495981 NOVA2Q9UNW9 492 aaKnown RBP6.43□□□□□ -1.38
VPS52-222ENST00000495981 NUP155O75694 1391 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 ROBO2Q9HCK4 1378 aa6.43□□□□□ -1.38
VPS52-222ENST00000495981 ZBBXA8MT70 800 aa6.42□□□□□ -1.38
VPS52-222ENST00000495981 APBA3O96018 575 aa6.42□□□□□ -1.38
VPS52-222ENST00000495981 F12P00748 615 aaPredicted RBP6.42□□□□□ -1.38
VPS52-222ENST00000495981 HDGFP51858 240 aaKnown RBP6.42□□□□□ -1.38
VPS52-222ENST00000495981 PUS10Q3MIT2 529 aaKnown RBP6.42□□□□□ -1.38
VPS52-222ENST00000495981 CRTC2Q53ET0 693 aaPredicted RBP6.42□□□□□ -1.38
VPS52-222ENST00000495981 ESCO1Q5FWF5 840 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms