RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 KLRG1Q96E93 195 aa23.84■■□□□ 1.41
TMEM53-209ENST00000495630 ZC3H4Q9UPT8 1303 aaKnown RBP23.84■■□□□ 1.41
TMEM53-209ENST00000495630 SERPINB2P05120 415 aa23.83■■□□□ 1.41
TMEM53-209ENST00000495630 KCPQ6ZWJ8 1503 aa23.83■■□□□ 1.41
TMEM53-209ENST00000495630 TJP1Q07157 1748 aa23.82■■□□□ 1.4
TMEM53-209ENST00000495630 HMOX1P09601 288 aa23.82■■□□□ 1.4
TMEM53-209ENST00000495630 JMYQ8N9B5 988 aa23.82■■□□□ 1.4
TMEM53-209ENST00000495630 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
TMEM53-209ENST00000495630 TTLL6Q8N841 843 aa23.81■■□□□ 1.4
TMEM53-209ENST00000495630 BCL2L12Q9HB09 334 aa23.81■■□□□ 1.4
TMEM53-209ENST00000495630 ZBTB1Q9Y2K1 713 aa23.81■■□□□ 1.4
TMEM53-209ENST00000495630 LMNB1P20700 586 aa23.8■■□□□ 1.4
TMEM53-209ENST00000495630 HTRA3P83110 453 aa23.8■■□□□ 1.4
TMEM53-209ENST00000495630 SMC1BQ8NDV3 1235 aa23.8■■□□□ 1.4
TMEM53-209ENST00000495630 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
TMEM53-209ENST00000495630 COL15A1P39059 1388 aa23.79■■□□□ 1.4
TMEM53-209ENST00000495630 ADAMTS7Q9UKP4 1686 aa23.79■■□□□ 1.4
TMEM53-209ENST00000495630 GLTPD2A6NH11 291 aa23.78■■□□□ 1.4
TMEM53-209ENST00000495630 H0YIN7 160 aa23.78■■□□□ 1.4
TMEM53-209ENST00000495630 DIAPH1O60610 1272 aaKnown RBP23.78■■□□□ 1.4
TMEM53-209ENST00000495630 STARD3NLO95772 234 aa23.78■■□□□ 1.4
TMEM53-209ENST00000495630 VEGFAP15692 232 aaPredicted RBP23.77■■□□□ 1.4
TMEM53-209ENST00000495630 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
TMEM53-209ENST00000495630 RASSF7Q02833 373 aa23.77■■□□□ 1.4
TMEM53-209ENST00000495630 C2CD5Q86YS7 1000 aa23.77■■□□□ 1.4
TMEM53-209ENST00000495630 MRC1P22897 1456 aa23.76■■□□□ 1.39
TMEM53-209ENST00000495630 A0A087WZG4 1122 aa23.76■■□□□ 1.39
TMEM53-209ENST00000495630 EIF5P55010 431 aaKnown RBP23.76■■□□□ 1.39
TMEM53-209ENST00000495630 PER1O15534 1290 aaPredicted RBP23.74■■□□□ 1.39
TMEM53-209ENST00000495630 PRELPP51888 382 aa23.74■■□□□ 1.39
TMEM53-209ENST00000495630 TTC5Q8N0Z6 440 aa23.74■■□□□ 1.39
TMEM53-209ENST00000495630 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
TMEM53-209ENST00000495630 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
TMEM53-209ENST00000495630 SBF1O95248 1867 aa23.73■■□□□ 1.39
TMEM53-209ENST00000495630 WDR90Q96KV7 1748 aa23.73■■□□□ 1.39
TMEM53-209ENST00000495630 BICDL1Q6ZP65 573 aa23.72■■□□□ 1.39
TMEM53-209ENST00000495630 BRIP1Q9BX63 1249 aa23.71■■□□□ 1.39
TMEM53-209ENST00000495630 KIF7Q2M1P5 1343 aa23.7■■□□□ 1.38
TMEM53-209ENST00000495630 NFKBIEO00221 500 aa23.7■■□□□ 1.38
TMEM53-209ENST00000495630 PDE6BP35913 854 aa23.7■■□□□ 1.38
TMEM53-209ENST00000495630 DPY19L2Q6NUT2 758 aa23.7■■□□□ 1.38
TMEM53-209ENST00000495630 NRXN2Q9P2S2 1712 aa23.7■■□□□ 1.38
TMEM53-209ENST00000495630 GNAT3A8MTJ3 354 aa23.69■■□□□ 1.38
TMEM53-209ENST00000495630 TEFQ10587 303 aa23.69■■□□□ 1.38
TMEM53-209ENST00000495630 COL13A1Q5TAT6 717 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-209ENST00000495630 TBC1D9BQ66K14 1250 aa23.69■■□□□ 1.38
TMEM53-209ENST00000495630 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
TMEM53-209ENST00000495630 IL17REQ8NFR9 667 aa23.69■■□□□ 1.38
TMEM53-209ENST00000495630 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-209ENST00000495630 ZNF496Q96IT1 587 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-209ENST00000495630 TNRC6CQ9HCJ0 1690 aaKnown RBP23.68■■□□□ 1.38
TMEM53-209ENST00000495630 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
TMEM53-209ENST00000495630 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
TMEM53-209ENST00000495630 ZNF622Q969S3 477 aaKnown RBP eCLIP23.68■■□□□ 1.38
TMEM53-209ENST00000495630 AFDNP55196 1824 aaKnown RBP23.68■■□□□ 1.38
TMEM53-209ENST00000495630 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-209ENST00000495630 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
TMEM53-209ENST00000495630 HEG1Q9ULI3 1381 aa23.66■■□□□ 1.38
TMEM53-209ENST00000495630 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
TMEM53-209ENST00000495630 POTECB2RU33 542 aa23.65■■□□□ 1.38
TMEM53-209ENST00000495630 NPM2Q86SE8 214 aaKnown RBP23.65■■□□□ 1.38
TMEM53-209ENST00000495630 U2SURPO15042 1029 aaKnown RBP23.64■■□□□ 1.37
TMEM53-209ENST00000495630 C21orf2O43822 256 aa23.64■■□□□ 1.37
TMEM53-209ENST00000495630 PRR5LQ6MZQ0 368 aa23.64■■□□□ 1.37
TMEM53-209ENST00000495630 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.37
TMEM53-209ENST00000495630 SETDB2Q96T68 719 aa23.64■■□□□ 1.37
TMEM53-209ENST00000495630 ERFEQ4G0M1 354 aa23.63■■□□□ 1.37
TMEM53-209ENST00000495630 ZNF330Q9Y3S2 320 aaPredicted RBP23.63■■□□□ 1.37
TMEM53-209ENST00000495630 A1BGP04217 495 aa23.62■■□□□ 1.37
TMEM53-209ENST00000495630 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
TMEM53-209ENST00000495630 ZNF219Q9P2Y4 722 aaPredicted RBP23.61■■□□□ 1.37
TMEM53-209ENST00000495630 LTBP3Q9NS15 1303 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 STYK1Q6J9G0 422 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 CCDC24Q8N4L8 307 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 NPC1L1Q9UHC9 1359 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 UBR2Q8IWV8 1755 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 DLEC1Q9Y238 1755 aa23.6■■□□□ 1.37
TMEM53-209ENST00000495630 CAMTA2O94983 1202 aa23.59■■□□□ 1.37
TMEM53-209ENST00000495630 CNBD1Q8NA66 436 aa23.59■■□□□ 1.37
TMEM53-209ENST00000495630 NPHP1O15259 732 aa23.58■■□□□ 1.37
TMEM53-209ENST00000495630 SRGNP10124 158 aa23.58■■□□□ 1.37
TMEM53-209ENST00000495630 SOGA3Q5TF21 947 aa23.58■■□□□ 1.37
TMEM53-209ENST00000495630 TNS4Q8IZW8 715 aa23.58■■□□□ 1.37
TMEM53-209ENST00000495630 TAOK3Q9H2K8 898 aa23.58■■□□□ 1.37
TMEM53-209ENST00000495630 CEMIPQ8WUJ3 1361 aa23.57■■□□□ 1.36
TMEM53-209ENST00000495630 BTBD11A6QL63 1104 aa23.57■■□□□ 1.36
TMEM53-209ENST00000495630 ST5P78524 1137 aa23.57■■□□□ 1.36
TMEM53-209ENST00000495630 MASTLQ96GX5 879 aa23.57■■□□□ 1.36
TMEM53-209ENST00000495630 PCNTO95613 3336 aa23.57■■□□□ 1.36
TMEM53-209ENST00000495630 CLEC4GQ6UXB4 293 aa23.56■■□□□ 1.36
TMEM53-209ENST00000495630 DZIP3Q86Y13 1208 aaKnown RBP23.56■■□□□ 1.36
TMEM53-209ENST00000495630 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
TMEM53-209ENST00000495630 KCNQ3O43525 872 aa23.55■■□□□ 1.36
TMEM53-209ENST00000495630 HSPA1AP0DMV8 641 aaKnown RBP23.55■■□□□ 1.36
TMEM53-209ENST00000495630 HSPA1BP0DMV9 641 aaKnown RBP23.55■■□□□ 1.36
TMEM53-209ENST00000495630 CHADLQ6NUI6 762 aa23.55■■□□□ 1.36
TMEM53-209ENST00000495630 PHACTR3Q96KR7 559 aa23.55■■□□□ 1.36
TMEM53-209ENST00000495630 USP16Q9Y5T5 823 aa23.55■■□□□ 1.36
TMEM53-209ENST00000495630 COL3A1P02461 1466 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-209ENST00000495630 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms