RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
CSNK1E-212ENST00000494610 KLRG1Q96E93 195 aa15.98■□□□□ 0.15
CSNK1E-212ENST00000494610 IL13P35225 146 aa15.97■□□□□ 0.15
CSNK1E-212ENST00000494610 NFIXQ14938 502 aa15.96■□□□□ 0.15
CSNK1E-212ENST00000494610 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
CSNK1E-212ENST00000494610 SOS1Q07889 1333 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 HMOX1P09601 288 aa15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 CYP19A1P11511 503 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 VIRMAQ69YN4 1812 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
CSNK1E-212ENST00000494610 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
CSNK1E-212ENST00000494610 ZPR1O75312 459 aa15.94■□□□□ 0.14
CSNK1E-212ENST00000494610 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
CSNK1E-212ENST00000494610 CCDC88AQ3V6T2 1871 aa15.94■□□□□ 0.14
CSNK1E-212ENST00000494610 FSTL1Q12841 308 aa15.93■□□□□ 0.14
CSNK1E-212ENST00000494610 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
CSNK1E-212ENST00000494610 JMYQ8N9B5 988 aa15.93■□□□□ 0.14
CSNK1E-212ENST00000494610 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-212ENST00000494610 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-212ENST00000494610 SERPINB2P05120 415 aa15.92■□□□□ 0.14
CSNK1E-212ENST00000494610 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
CSNK1E-212ENST00000494610 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-212ENST00000494610 COL15A1P39059 1388 aa15.91■□□□□ 0.14
CSNK1E-212ENST00000494610 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-212ENST00000494610 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
CSNK1E-212ENST00000494610 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
CSNK1E-212ENST00000494610 NFKBIEO00221 500 aa15.9■□□□□ 0.14
CSNK1E-212ENST00000494610 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-212ENST00000494610 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
CSNK1E-212ENST00000494610 TIAM2Q8IVF5 1701 aa15.89■□□□□ 0.13
CSNK1E-212ENST00000494610 POTECB2RU33 542 aa15.89■□□□□ 0.13
CSNK1E-212ENST00000494610 DLEC1Q9Y238 1755 aa15.89■□□□□ 0.13
CSNK1E-212ENST00000494610 LMNB1P20700 586 aa15.88■□□□□ 0.13
CSNK1E-212ENST00000494610 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
CSNK1E-212ENST00000494610 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
CSNK1E-212ENST00000494610 MRC1P22897 1456 aa15.88■□□□□ 0.13
CSNK1E-212ENST00000494610 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
CSNK1E-212ENST00000494610 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
CSNK1E-212ENST00000494610 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-212ENST00000494610 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
CSNK1E-212ENST00000494610 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
CSNK1E-212ENST00000494610 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
CSNK1E-212ENST00000494610 TNS4Q8IZW8 715 aa15.86■□□□□ 0.13
CSNK1E-212ENST00000494610 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 C21orf2O43822 256 aa15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 POTEIP0CG38 1075 aa15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 VEGFAP15692 232 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 ZNF330Q9Y3S2 320 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
CSNK1E-212ENST00000494610 H0YIN7 160 aa15.84■□□□□ 0.13
CSNK1E-212ENST00000494610 HSPA1AP0DMV8 641 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-212ENST00000494610 HSPA1BP0DMV9 641 aaKnown RBP15.84■□□□□ 0.13
CSNK1E-212ENST00000494610 ZNF622Q969S3 477 aaKnown RBP eCLIP15.84■□□□□ 0.136e-8■■□□□ 11.7
CSNK1E-212ENST00000494610 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
CSNK1E-212ENST00000494610 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-212ENST00000494610 EIF5P55010 431 aaKnown RBP15.83■□□□□ 0.12
CSNK1E-212ENST00000494610 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.12
CSNK1E-212ENST00000494610 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
CSNK1E-212ENST00000494610 CACNA1SQ13698 1873 aa15.82■□□□□ 0.12
CSNK1E-212ENST00000494610 KCNQ3O43525 872 aa15.82■□□□□ 0.12
CSNK1E-212ENST00000494610 PRR5LQ6MZQ0 368 aa15.82■□□□□ 0.12
CSNK1E-212ENST00000494610 IL17REQ8NFR9 667 aa15.82■□□□□ 0.12
CSNK1E-212ENST00000494610 A1BGP04217 495 aa15.81■□□□□ 0.12
CSNK1E-212ENST00000494610 SLX4Q8IY92 1834 aa15.81■□□□□ 0.12
CSNK1E-212ENST00000494610 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
CSNK1E-212ENST00000494610 ZC3H4Q9UPT8 1303 aaKnown RBP15.8■□□□□ 0.12
CSNK1E-212ENST00000494610 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
CSNK1E-212ENST00000494610 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
CSNK1E-212ENST00000494610 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-212ENST00000494610 ERFEQ4G0M1 354 aa15.79■□□□□ 0.12
CSNK1E-212ENST00000494610 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
CSNK1E-212ENST00000494610 MKRN1Q9UHC7 482 aaKnown RBP15.79■□□□□ 0.12
CSNK1E-212ENST00000494610 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
CSNK1E-212ENST00000494610 DICER1Q9UPY3 1922 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-212ENST00000494610 PRAMEF22A3QJZ6 481 aa15.78■□□□□ 0.12
CSNK1E-212ENST00000494610 STARD3NLO95772 234 aa15.78■□□□□ 0.12
CSNK1E-212ENST00000494610 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
CSNK1E-212ENST00000494610 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 BRIP1Q9BX63 1249 aa15.77■□□□□ 0.12
CSNK1E-212ENST00000494610 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.11
CSNK1E-212ENST00000494610 COL3A1P02461 1466 aaPredicted RBP15.77■□□□□ 0.11
CSNK1E-212ENST00000494610 CAMTA2O94983 1202 aa15.76■□□□□ 0.11
CSNK1E-212ENST00000494610 PDE6BP35913 854 aa15.75■□□□□ 0.11
CSNK1E-212ENST00000494610 TEFQ10587 303 aa15.75■□□□□ 0.11
CSNK1E-212ENST00000494610 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
CSNK1E-212ENST00000494610 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-212ENST00000494610 PHACTR3Q96KR7 559 aa15.75■□□□□ 0.11
CSNK1E-212ENST00000494610 A0A087WZG4 1122 aa15.74■□□□□ 0.11
CSNK1E-212ENST00000494610 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
CSNK1E-212ENST00000494610 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
CSNK1E-212ENST00000494610 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms