RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 RUFY3Q7L099 469 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 TRIM5Q9C035 493 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 C14orf93Q9H972 538 aaKnown RBP12.07□□□□□ -0.48
LINC00488-201ENST00000494582 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 CPA1P15085 419 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 MCCP23508 829 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 MLECQ14165 292 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
LINC00488-201ENST00000494582 KIF1BO60333 1816 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 H2AFXP16104 143 aaPredicted RBP12.06□□□□□ -0.48
LINC00488-201ENST00000494582 GNAI1P63096 354 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 TTC14Q96N46 770 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 GLI2P10070 1586 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 PTPRCP08575 1304 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 AK2P54819 239 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 TTC6Q86TZ1 520 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 ERO1AQ96HE7 468 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
LINC00488-201ENST00000494582 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
LINC00488-201ENST00000494582 TRIM66O15016 1216 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 TMX1Q9H3N1 280 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 RSPH14Q9UHP6 348 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 EVC2Q86UK5 1308 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
LINC00488-201ENST00000494582 MAP3K11Q16584 847 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
LINC00488-201ENST00000494582 HSPA4P34932 840 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 CLCN6P51797 869 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 GYS2P54840 703 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 ST5P78524 1137 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 SYT10Q6XYQ8 523 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 LRRC8AQ8IWT6 810 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 PNMA6AP0CW24 399 aaPredicted RBP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 ST3GAL1Q11201 340 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 TDRD7Q8NHU6 1098 aaKnown RBP12.04□□□□□ -0.48
LINC00488-201ENST00000494582 NUP62CLQ9H1M0 184 aa12.04□□□□□ -0.48
LINC00488-201ENST00000494582 FAM193AP78312 1265 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 SECISBP2LQ93073 1101 aaKnown RBP12.03□□□□□ -0.48
LINC00488-201ENST00000494582 TSPYL1Q9H0U9 437 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 POLKQ9UBT6 870 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 SMC3Q9UQE7 1217 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 ABCC1P33527 1531 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 POLR3GO15318 223 aaPredicted RBP12.03□□□□□ -0.48
LINC00488-201ENST00000494582 SLU7O95391 586 aaKnown RBP12.03□□□□□ -0.48
LINC00488-201ENST00000494582 GJB2P29033 226 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
LINC00488-201ENST00000494582 ZFYVE16Q7Z3T8 1539 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 KIF3BO15066 747 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 CCZ1BP86790 482 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 CCZ1P86791 482 aaPredicted RBP12.02□□□□□ -0.48
LINC00488-201ENST00000494582 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.48
LINC00488-201ENST00000494582 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.48
LINC00488-201ENST00000494582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.48
LINC00488-201ENST00000494582 CREBRFQ8IUR6 639 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 CCDC83Q8IWF9 413 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 DACT1Q9NYF0 836 aa12.02□□□□□ -0.48
LINC00488-201ENST00000494582 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
LINC00488-201ENST00000494582 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
LINC00488-201ENST00000494582 SMARCE1Q969G3 411 aa12.02□□□□□ -0.49
LINC00488-201ENST00000494582 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
LINC00488-201ENST00000494582 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
LINC00488-201ENST00000494582 VPS37CA5D8V6 355 aaPredicted RBP12.01□□□□□ -0.49
LINC00488-201ENST00000494582 SKILP12757 684 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 FERMT3Q86UX7 667 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
LINC00488-201ENST00000494582 SOX12O15370 315 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
LINC00488-201ENST00000494582 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 CCAR2Q8N163 923 aaKnown RBP12.01□□□□□ -0.49
LINC00488-201ENST00000494582 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
LINC00488-201ENST00000494582 ANKRD26Q9UPS8 1709 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 ADGRB3O60242 1522 aa12.01□□□□□ -0.49
LINC00488-201ENST00000494582 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 DLG5Q8TDM6 1919 aa12□□□□□ -0.49
LINC00488-201ENST00000494582 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
LINC00488-201ENST00000494582 ZRANB2O95218 330 aaKnown RBP eCLIP12□□□□□ -0.49
LINC00488-201ENST00000494582 ZNF165P49910 485 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms