RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
ATG4B-225ENST00000494465 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
ATG4B-225ENST00000494465 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
ATG4B-225ENST00000494465 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
ATG4B-225ENST00000494465 ATP8B2P98198 1209 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 KSR2Q6VAB6 950 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 FMNL2Q96PY5 1086 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 UBTFL1P0CB47 393 aaPredicted RBP20.61■□□□□ 0.89
ATG4B-225ENST00000494465 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 USP35Q9P2H5 1018 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
ATG4B-225ENST00000494465 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 DISP2A7MBM2 1401 aa20.61■□□□□ 0.89
ATG4B-225ENST00000494465 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
ATG4B-225ENST00000494465 LRP10Q7Z4F1 713 aa20.6■□□□□ 0.89
ATG4B-225ENST00000494465 PLEKHM2Q8IWE5 1019 aa20.59■□□□□ 0.89
ATG4B-225ENST00000494465 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
ATG4B-225ENST00000494465 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-225ENST00000494465 WNK3Q9BYP7 1800 aa20.58■□□□□ 0.89
ATG4B-225ENST00000494465 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-225ENST00000494465 ZBTB47Q9UFB7 747 aaPredicted RBP20.58■□□□□ 0.88
ATG4B-225ENST00000494465 SMARCA5O60264 1052 aaPredicted RBP20.57■□□□□ 0.88
ATG4B-225ENST00000494465 NRAPQ86VF7 1730 aa20.56■□□□□ 0.88
ATG4B-225ENST00000494465 ALDH1L1O75891 902 aa20.56■□□□□ 0.88
ATG4B-225ENST00000494465 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
ATG4B-225ENST00000494465 TNS2Q63HR2 1409 aa20.56■□□□□ 0.88
ATG4B-225ENST00000494465 MYL6BP14649 208 aa20.56■□□□□ 0.88
ATG4B-225ENST00000494465 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
ATG4B-225ENST00000494465 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
ATG4B-225ENST00000494465 APBB1O00213 710 aa20.55■□□□□ 0.88
ATG4B-225ENST00000494465 DDX58O95786 925 aaKnown RBP20.55■□□□□ 0.88
ATG4B-225ENST00000494465 SSH3Q8TE77 659 aa20.55■□□□□ 0.88
ATG4B-225ENST00000494465 EXOC6BQ9Y2D4 811 aa20.55■□□□□ 0.88
ATG4B-225ENST00000494465 GSPT1P15170 499 aaKnown RBP20.54■□□□□ 0.88
ATG4B-225ENST00000494465 MYT1Q01538 1121 aa20.54■□□□□ 0.88
ATG4B-225ENST00000494465 POLA2Q14181 598 aa20.54■□□□□ 0.88
ATG4B-225ENST00000494465 CWF19L2Q2TBE0 894 aaKnown RBP20.54■□□□□ 0.88
ATG4B-225ENST00000494465 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
ATG4B-225ENST00000494465 IBTKQ9P2D0 1353 aaPredicted RBP20.54■□□□□ 0.88
ATG4B-225ENST00000494465 ITGB4P16144 1822 aa20.54■□□□□ 0.88
ATG4B-225ENST00000494465 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
ATG4B-225ENST00000494465 TBC1D32Q96NH3 1257 aa20.53■□□□□ 0.88
ATG4B-225ENST00000494465 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
ATG4B-225ENST00000494465 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
ATG4B-225ENST00000494465 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.88
ATG4B-225ENST00000494465 TOM1O60784 492 aa20.52■□□□□ 0.88
ATG4B-225ENST00000494465 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
ATG4B-225ENST00000494465 IGKV5-2P06315 115 aa20.51■□□□□ 0.87
ATG4B-225ENST00000494465 TTC22Q5TAA0 569 aa20.51■□□□□ 0.87
ATG4B-225ENST00000494465 UTYO14607 1347 aa20.51■□□□□ 0.87
ATG4B-225ENST00000494465 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
ATG4B-225ENST00000494465 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
ATG4B-225ENST00000494465 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
ATG4B-225ENST00000494465 RIC3Q7Z5B4 369 aa20.5■□□□□ 0.87
ATG4B-225ENST00000494465 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 LRP6O75581 1613 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 MTX1Q13505 466 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 NBPF14Q5TI25 921 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
ATG4B-225ENST00000494465 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 LRRCC1Q9C099 1032 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 C9orf78Q9NZ63 289 aaPredicted RBP20.49■□□□□ 0.87
ATG4B-225ENST00000494465 TUBGCP6Q96RT7 1819 aa20.49■□□□□ 0.87
ATG4B-225ENST00000494465 METTL22Q9BUU2 404 aaPredicted RBP20.49■□□□□ 0.87
ATG4B-225ENST00000494465 SRGAP3O43295 1099 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
ATG4B-225ENST00000494465 ANKRD13DQ6ZTN6 518 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 OSBPL3Q9H4L5 887 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 GRM8O00222 908 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
ATG4B-225ENST00000494465 PIGBQ92521 554 aa20.48■□□□□ 0.87
ATG4B-225ENST00000494465 NWD2Q9ULI1 1742 aa20.47■□□□□ 0.87
ATG4B-225ENST00000494465 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
ATG4B-225ENST00000494465 NEURL1BA8MQ27 555 aa20.47■□□□□ 0.87
ATG4B-225ENST00000494465 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
ATG4B-225ENST00000494465 KAZALD1Q96I82 304 aa20.47■□□□□ 0.87
ATG4B-225ENST00000494465 ANP32EQ9BTT0 268 aa20.47■□□□□ 0.87
ATG4B-225ENST00000494465 NUP188Q5SRE5 1749 aa20.46■□□□□ 0.87
ATG4B-225ENST00000494465 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
ATG4B-225ENST00000494465 PDE1AP54750 535 aa20.45■□□□□ 0.86
ATG4B-225ENST00000494465 MYD88Q99836 296 aa20.45■□□□□ 0.86
ATG4B-225ENST00000494465 C22orf23Q9BZE7 217 aa20.45■□□□□ 0.86
ATG4B-225ENST00000494465 ASAP1Q9ULH1 1129 aa20.45■□□□□ 0.86
ATG4B-225ENST00000494465 SLIT2O94813 1529 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 EXOC5O00471 708 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 A1BGP04217 495 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 GCKRQ14397 625 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 SUCLG2Q96I99 432 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 BCL9O00512 1426 aa20.44■□□□□ 0.86
ATG4B-225ENST00000494465 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
ATG4B-225ENST00000494465 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms