RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 MPNDQ8N594 471 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
COL25A1-204ENST00000494183 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 GOLIM4O00461 696 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 KIAA0556O60303 1618 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 AK7Q96M32 723 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 TBX22Q9Y458 520 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 NUP160Q12769 1436 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 ARHGAP45Q92619 1136 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 PUS7Q96PZ0 661 aaKnown RBP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 ZNF213O14771 459 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 AKAP4Q5JQC9 854 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 SPC24Q8NBT2 197 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 CDC5LQ99459 802 aaKnown RBP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 EYA1Q99502 592 aa13.75□□□□□ -0.21
COL25A1-204ENST00000494183 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
COL25A1-204ENST00000494183 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-204ENST00000494183 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-204ENST00000494183 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 SERPINC1P01008 464 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-204ENST00000494183 KRT24Q2M2I5 525 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 ZFYVE27Q5T4F4 411 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 ADAMTS12P58397 1594 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 GPS2Q13227 327 aa13.74□□□□□ -0.21
COL25A1-204ENST00000494183 RFC4P35249 363 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 DDB1Q16531 1140 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 EVI5LQ96CN4 794 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
COL25A1-204ENST00000494183 ABCC2Q92887 1545 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 FLT4P35916 1363 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 IQCA1Q86XH1 822 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 WASF1Q92558 559 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
COL25A1-204ENST00000494183 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.72□□□□□ -0.21
COL25A1-204ENST00000494183 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 NPATQ14207 1427 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 WDR62O43379 1518 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
COL25A1-204ENST00000494183 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
COL25A1-204ENST00000494183 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
COL25A1-204ENST00000494183 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 GUCY1B3Q02153 619 aa13.71□□□□□ -0.21
COL25A1-204ENST00000494183 STIM1Q13586 685 aa13.71□□□□□ -0.21
COL25A1-204ENST00000494183 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 ATP6V1AP38606 617 aa13.71□□□□□ -0.21
COL25A1-204ENST00000494183 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 TCOF1Q13428 1488 aaKnown RBP13.71□□□□□ -0.21
COL25A1-204ENST00000494183 A0A1W2PP64 1363 aa13.71□□□□□ -0.22
COL25A1-204ENST00000494183 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.22
COL25A1-204ENST00000494183 IL2RBP14784 551 aa13.71□□□□□ -0.22
COL25A1-204ENST00000494183 KSR2Q6VAB6 950 aa13.71□□□□□ -0.22
COL25A1-204ENST00000494183 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.22
COL25A1-204ENST00000494183 GRM8O00222 908 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
COL25A1-204ENST00000494183 HAND2P61296 217 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 ZNF76P36508 570 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 BMP2KQ9NSY1 1161 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-204ENST00000494183 HMGB1P09429 215 aaKnown RBP13.7□□□□□ -0.22
COL25A1-204ENST00000494183 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
COL25A1-204ENST00000494183 VAMP4O75379 141 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 ORAI2Q96SN7 254 aa13.7□□□□□ -0.22
COL25A1-204ENST00000494183 SH2B1Q9NRF2 756 aaPredicted RBP13.7□□□□□ -0.22
COL25A1-204ENST00000494183 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
COL25A1-204ENST00000494183 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
COL25A1-204ENST00000494183 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
COL25A1-204ENST00000494183 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
COL25A1-204ENST00000494183 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
COL25A1-204ENST00000494183 IQSEC3Q9UPP2 1182 aaPredicted RBP13.69□□□□□ -0.22
COL25A1-204ENST00000494183 SLC12A7Q9Y666 1083 aa13.69□□□□□ -0.22
COL25A1-204ENST00000494183 ANKRD44Q8N8A2 993 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
COL25A1-204ENST00000494183 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
COL25A1-204ENST00000494183 BRPF3Q9ULD4 1205 aa13.68□□□□□ -0.22
COL25A1-204ENST00000494183 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms