RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ERCC5P28715 1186 aaPredicted RBP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 PPP1R26Q5T8A7 1209 aaPredicted RBP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 ALKBH2Q6NS38 261 aa6.79□□□□□ -1.32
GTF3A-208ENST00000493903 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
GTF3A-208ENST00000493903 TMC7Q7Z402 723 aa6.79□□□□□ -1.32
GTF3A-208ENST00000493903 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 PURBQ96QR8 312 aaKnown RBP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 CDK11AQ9UQ88 783 aaPredicted RBP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 LGR5O75473 907 aa6.78□□□□□ -1.32
GTF3A-208ENST00000493903 BMP1P13497 986 aa6.78□□□□□ -1.32
GTF3A-208ENST00000493903 NAA30Q147X3 362 aaPredicted RBP6.78□□□□□ -1.32
GTF3A-208ENST00000493903 DMRTB1Q96MA1 342 aa6.78□□□□□ -1.32
GTF3A-208ENST00000493903 BRPF3Q9ULD4 1205 aa6.78□□□□□ -1.32
GTF3A-208ENST00000493903 TMEM229AB2RXF0 380 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 ERVH48-1M5A8F1 160 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 HDLBPQ00341 1268 aaKnown RBP6.77□□□□□ -1.33
GTF3A-208ENST00000493903 VTI1AQ96AJ9 217 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 ESF1Q9H501 851 aaKnown RBP6.77□□□□□ -1.33
GTF3A-208ENST00000493903 ATP13A2Q9NQ11 1180 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 TMPRSS4Q9NRS4 437 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 EMILIN1Q9Y6C2 1016 aa6.77□□□□□ -1.33
GTF3A-208ENST00000493903 POTECB2RU33 542 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 PRPF40AO75400 957 aaKnown RBP6.76□□□□□ -1.33
GTF3A-208ENST00000493903 MPSTP25325 297 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 ERVK-9P63128 1117 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 XPCQ01831 940 aaPredicted RBP6.76□□□□□ -1.33
GTF3A-208ENST00000493903 PLCB3Q01970 1234 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
GTF3A-208ENST00000493903 DSC3Q14574 896 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 C16orf46Q6P387 395 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 SCG3Q8WXD2 468 aaKnown RBP6.76□□□□□ -1.33
GTF3A-208ENST00000493903 SPATA32Q96LK8 384 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
GTF3A-208ENST00000493903 ATAD2Q6PL18 1390 aa6.76□□□□□ -1.33
GTF3A-208ENST00000493903 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
GTF3A-208ENST00000493903 TRIM46Q7Z4K8 759 aa6.75□□□□□ -1.33
GTF3A-208ENST00000493903 ZNF784Q8NCA9 323 aaPredicted RBP6.75□□□□□ -1.33
GTF3A-208ENST00000493903 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
GTF3A-208ENST00000493903 PGPEP1Q9NXJ5 209 aa6.75□□□□□ -1.33
GTF3A-208ENST00000493903 GMPR2Q9P2T1 348 aaKnown RBP6.75□□□□□ -1.33
GTF3A-208ENST00000493903 LDHBP07195 334 aaKnown RBP6.74□□□□□ -1.33
GTF3A-208ENST00000493903 EPHA4P54764 986 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 GDF10P55107 478 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 CBLBQ13191 982 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 LDLRAD1Q5T700 205 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 CC2D2BQ6DHV5 1058 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 TMC4Q7Z404 712 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 PIK3R5Q8WYR1 880 aa6.74□□□□□ -1.33
GTF3A-208ENST00000493903 EIF1AXP47813 144 aaKnown RBP6.73□□□□□ -1.33
GTF3A-208ENST00000493903 SCNN1DP51172 638 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 ATP2B2Q01814 1243 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 EHHADHQ08426 723 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
GTF3A-208ENST00000493903 TNS4Q8IZW8 715 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 MEIOBQ8N635 442 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 SLC4A9Q96Q91 983 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 FAM129BQ96TA1 746 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 STIM2Q9P246 746 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 PARP2Q9UGN5 583 aa6.73□□□□□ -1.33
GTF3A-208ENST00000493903 FZD6O60353 706 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 SORBS3O60504 671 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 LILRA1O75019 489 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 INHAP05111 366 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 SCTRP47872 440 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 DAB2P98082 770 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 ABTB2Q8N961 1025 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 TMEM87AQ8NBN3 555 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 TGIF2Q9GZN2 237 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 CYLDQ9NQC7 956 aa6.72□□□□□ -1.33
GTF3A-208ENST00000493903 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
GTF3A-208ENST00000493903 CADPSQ9ULU8 1353 aa6.71□□□□□ -1.33
GTF3A-208ENST00000493903 PPP1R12BO60237 982 aaPredicted RBP6.71□□□□□ -1.34
GTF3A-208ENST00000493903 IGHA2P01877 340 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 ADD1P35611 737 aaKnown RBP6.71□□□□□ -1.34
GTF3A-208ENST00000493903 MAPK8P45983 427 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 RAD51AP2Q09MP3 1159 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 C6orf118Q5T5N4 469 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 Q6ZVU0 165 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 METTL16Q86W50 562 aaKnown RBP6.71□□□□□ -1.34
GTF3A-208ENST00000493903 RNF34Q969K3 372 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 AGBL1Q96MI9 1066 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 ZFP42Q96MM3 310 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 DUSP9Q99956 384 aaKnown RBP6.71□□□□□ -1.34
GTF3A-208ENST00000493903 SAP130Q9H0E3 1048 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
GTF3A-208ENST00000493903 OSBPL3Q9H4L5 887 aa6.71□□□□□ -1.34
GTF3A-208ENST00000493903 C11orf95C9JLR9 678 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-208ENST00000493903 SMARCA5O60264 1052 aaPredicted RBP6.7□□□□□ -1.34
GTF3A-208ENST00000493903 FOXK2Q01167 660 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 PSMD2Q13200 908 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 AAMPQ13685 434 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 ESCO1Q5FWF5 840 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 ALG1LQ6GMV1 187 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 NT5DC4Q86YG4 428 aa6.7□□□□□ -1.34
GTF3A-208ENST00000493903 LINC00528Q8N1L1 170 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms