RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 HOXC9P31274 260 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.82
CAB39-206ENST00000493540 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
CAB39-206ENST00000493540 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 TJP1Q07157 1748 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.82
CAB39-206ENST00000493540 SBF1O95248 1867 aa9.96□□□□□ -0.82
CAB39-206ENST00000493540 DPYSL4O14531 572 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 SLC34A2O95436 690 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
CAB39-206ENST00000493540 OXER1Q8TDS5 423 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 SLC16A10Q8TF71 515 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 NLRP2Q9NX02 1062 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 ADCY9O60503 1353 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 INSRP06213 1382 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 TONSLQ96HA7 1378 aa9.95□□□□□ -0.82
CAB39-206ENST00000493540 SMG6Q86US8 1419 aaKnown RBP9.94□□□□□ -0.82
CAB39-206ENST00000493540 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
CAB39-206ENST00000493540 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
CAB39-206ENST00000493540 FLT4P35916 1363 aa9.93□□□□□ -0.82
CAB39-206ENST00000493540 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
CAB39-206ENST00000493540 TBC1D12O60347 775 aa9.93□□□□□ -0.82
CAB39-206ENST00000493540 MMRN1Q13201 1228 aa9.93□□□□□ -0.82
CAB39-206ENST00000493540 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
CAB39-206ENST00000493540 ARXQ96QS3 562 aa9.93□□□□□ -0.82
CAB39-206ENST00000493540 USP47Q96K76 1375 aa9.92□□□□□ -0.82
CAB39-206ENST00000493540 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
CAB39-206ENST00000493540 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
CAB39-206ENST00000493540 NRXN2Q9P2S2 1712 aa9.91□□□□□ -0.82
CAB39-206ENST00000493540 ST20-MTHFSA0A0A6YYL1 179 aa9.91□□□□□ -0.82
CAB39-206ENST00000493540 FYB1O15117 783 aa9.91□□□□□ -0.82
CAB39-206ENST00000493540 NEUROD1Q13562 356 aa9.91□□□□□ -0.82
CAB39-206ENST00000493540 KDRP35968 1356 aa9.9□□□□□ -0.82
CAB39-206ENST00000493540 SEMA3EO15041 775 aa9.9□□□□□ -0.82
CAB39-206ENST00000493540 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
CAB39-206ENST00000493540 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
CAB39-206ENST00000493540 PDIA6Q15084 440 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 COG3Q96JB2 828 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 NBPF4Q96M43 638 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 CCDC88AQ3V6T2 1871 aa9.89□□□□□ -0.83
CAB39-206ENST00000493540 PCDH11XQ9BZA7 1347 aa9.88□□□□□ -0.83
CAB39-206ENST00000493540 PCDH11YQ9BZA8 1340 aa9.88□□□□□ -0.83
CAB39-206ENST00000493540 TESPA1A2RU30 521 aaPredicted RBP9.88□□□□□ -0.83
CAB39-206ENST00000493540 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
CAB39-206ENST00000493540 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
CAB39-206ENST00000493540 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
CAB39-206ENST00000493540 PCNTO95613 3336 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
CAB39-206ENST00000493540 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 SNPHO15079 494 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 CYP27B1O15528 508 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
CAB39-206ENST00000493540 FBLN1P23142 703 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
CAB39-206ENST00000493540 NLGN2Q8NFZ4 835 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
CAB39-206ENST00000493540 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
CAB39-206ENST00000493540 TNRC6CQ9HCJ0 1690 aaKnown RBP9.87□□□□□ -0.83
CAB39-206ENST00000493540 MRC1P22897 1456 aa9.86□□□□□ -0.83
CAB39-206ENST00000493540 ARFGEF2Q9Y6D5 1785 aa9.86□□□□□ -0.83
CAB39-206ENST00000493540 RRS1Q15050 365 aaKnown RBP9.86□□□□□ -0.83
CAB39-206ENST00000493540 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
CAB39-206ENST00000493540 WDR90Q96KV7 1748 aa9.86□□□□□ -0.83
CAB39-206ENST00000493540 EVI5O60447 810 aa9.85□□□□□ -0.83
CAB39-206ENST00000493540 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
CAB39-206ENST00000493540 KCNQ4P56696 695 aa9.85□□□□□ -0.83
CAB39-206ENST00000493540 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
CAB39-206ENST00000493540 AMIGO3Q86WK7 504 aa9.85□□□□□ -0.83
CAB39-206ENST00000493540 COL23A1Q86Y22 540 aaPredicted RBP9.85□□□□□ -0.83
CAB39-206ENST00000493540 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
CAB39-206ENST00000493540 CCNL1Q9UK58 526 aaPredicted RBP9.85□□□□□ -0.83
CAB39-206ENST00000493540 SCN7AQ01118 1682 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 HSP90AB2PQ58FF8 381 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 ZNF710Q8N1W2 664 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
CAB39-206ENST00000493540 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 ANKRD31Q8N7Z5 1873 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 TIAM2Q8IVF5 1701 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 PXDNLA1KZ92 1463 aa9.84□□□□□ -0.83
CAB39-206ENST00000493540 BCORQ6W2J9 1755 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 KDM6AO15550 1401 aaPredicted RBP9.83□□□□□ -0.84
CAB39-206ENST00000493540 C10orf71Q711Q0 1435 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
CAB39-206ENST00000493540 POLD1P28340 1107 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 AMPHP49418 695 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 TMF1P82094 1093 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 USHBP1Q8N6Y0 703 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 LTV1Q96GA3 475 aaPredicted RBP9.83□□□□□ -0.84
CAB39-206ENST00000493540 TFCP2L1Q9NZI6 479 aa9.83□□□□□ -0.84
CAB39-206ENST00000493540 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
CAB39-206ENST00000493540 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
CAB39-206ENST00000493540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.82□□□□□ -0.84
CAB39-206ENST00000493540 CD2APQ9Y5K6 639 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms