RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
PTPN7-216ENST00000492977 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
PTPN7-216ENST00000492977 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
PTPN7-216ENST00000492977 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
PTPN7-216ENST00000492977 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN7-216ENST00000492977 PI4KAP2A4QPH2 592 aa17.52■□□□□ 0.39
PTPN7-216ENST00000492977 PROM2Q8N271 834 aa17.52■□□□□ 0.39
PTPN7-216ENST00000492977 PI4KAP1Q8N8J0 262 aa17.52■□□□□ 0.39
PTPN7-216ENST00000492977 USP44Q9H0E7 712 aa17.52■□□□□ 0.39
PTPN7-216ENST00000492977 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
PTPN7-216ENST00000492977 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
PTPN7-216ENST00000492977 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
PTPN7-216ENST00000492977 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
PTPN7-216ENST00000492977 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
PTPN7-216ENST00000492977 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
PTPN7-216ENST00000492977 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
PTPN7-216ENST00000492977 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
PTPN7-216ENST00000492977 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
PTPN7-216ENST00000492977 ADCY9O60503 1353 aa17.5■□□□□ 0.39
PTPN7-216ENST00000492977 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
PTPN7-216ENST00000492977 ANXA1P04083 346 aa17.49■□□□□ 0.39
PTPN7-216ENST00000492977 UBTFL1P0CB47 393 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-216ENST00000492977 POLA2Q14181 598 aa17.49■□□□□ 0.39
PTPN7-216ENST00000492977 PDIA6Q15084 440 aa17.49■□□□□ 0.39
PTPN7-216ENST00000492977 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
PTPN7-216ENST00000492977 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
PTPN7-216ENST00000492977 SHANK3Q9BYB0 1731 aa17.48■□□□□ 0.39
PTPN7-216ENST00000492977 C5P01031 1676 aa17.48■□□□□ 0.39
PTPN7-216ENST00000492977 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
PTPN7-216ENST00000492977 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
PTPN7-216ENST00000492977 TOM1O60784 492 aa17.47■□□□□ 0.39
PTPN7-216ENST00000492977 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
PTPN7-216ENST00000492977 PHLPP1O60346 1717 aa17.47■□□□□ 0.39
PTPN7-216ENST00000492977 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.39
PTPN7-216ENST00000492977 HDAC5Q9UQL6 1122 aa17.46■□□□□ 0.39
PTPN7-216ENST00000492977 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
PTPN7-216ENST00000492977 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
PTPN7-216ENST00000492977 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
PTPN7-216ENST00000492977 COL16A1Q07092 1604 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-216ENST00000492977 SEC24BO95487 1268 aa17.45■□□□□ 0.38
PTPN7-216ENST00000492977 CAPN15O75808 1086 aa17.45■□□□□ 0.38
PTPN7-216ENST00000492977 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
PTPN7-216ENST00000492977 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
PTPN7-216ENST00000492977 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
PTPN7-216ENST00000492977 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
PTPN7-216ENST00000492977 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
PTPN7-216ENST00000492977 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 VASPP50552 380 aaPredicted RBP17.43■□□□□ 0.38
PTPN7-216ENST00000492977 LINS1Q8NG48 757 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
PTPN7-216ENST00000492977 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
PTPN7-216ENST00000492977 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
PTPN7-216ENST00000492977 PAPPAQ13219 1627 aa17.42■□□□□ 0.38
PTPN7-216ENST00000492977 PLCH1Q4KWH8 1693 aa17.41■□□□□ 0.38
PTPN7-216ENST00000492977 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-216ENST00000492977 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
PTPN7-216ENST00000492977 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
PTPN7-216ENST00000492977 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
PTPN7-216ENST00000492977 GLI3P10071 1580 aa17.41■□□□□ 0.38
PTPN7-216ENST00000492977 MYL6BP14649 208 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
PTPN7-216ENST00000492977 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 NEXNQ0ZGT2 675 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
PTPN7-216ENST00000492977 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
PTPN7-216ENST00000492977 UTYO14607 1347 aa17.39■□□□□ 0.38
PTPN7-216ENST00000492977 KCPQ6ZWJ8 1503 aa17.39■□□□□ 0.38
PTPN7-216ENST00000492977 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-216ENST00000492977 RAB11FIP3O75154 756 aa17.39■□□□□ 0.37
PTPN7-216ENST00000492977 ANKRD13DQ6ZTN6 518 aa17.39■□□□□ 0.37
PTPN7-216ENST00000492977 PPP1R42Q7Z4L9 355 aa17.39■□□□□ 0.37
PTPN7-216ENST00000492977 C16orf71Q8IYS4 520 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-216ENST00000492977 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.37
PTPN7-216ENST00000492977 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-216ENST00000492977 EXOC6BQ9Y2D4 811 aa17.39■□□□□ 0.37
PTPN7-216ENST00000492977 APBB1O00213 710 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 EXOC5O00471 708 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
PTPN7-216ENST00000492977 MTX1Q13505 466 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 OSBPL3Q9H4L5 887 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 THRAP3Q9Y2W1 955 aaKnown RBP17.38■□□□□ 0.37
PTPN7-216ENST00000492977 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
PTPN7-216ENST00000492977 GRM8O00222 908 aa17.37■□□□□ 0.37
PTPN7-216ENST00000492977 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
PTPN7-216ENST00000492977 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
PTPN7-216ENST00000492977 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 LRP6O75581 1613 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 WNK3Q9BYP7 1800 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 GSPT1P15170 499 aaKnown RBP17.36■□□□□ 0.37
PTPN7-216ENST00000492977 HSP90AB4PQ58FF6 505 aa17.36■□□□□ 0.37
PTPN7-216ENST00000492977 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms