RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
GPNMB-214ENST00000492858 NFIXQ14938 502 aa16.67■□□□□ 0.26
GPNMB-214ENST00000492858 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
GPNMB-214ENST00000492858 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
GPNMB-214ENST00000492858 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
GPNMB-214ENST00000492858 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
GPNMB-214ENST00000492858 TJP1Q07157 1748 aa16.65■□□□□ 0.26
GPNMB-214ENST00000492858 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
GPNMB-214ENST00000492858 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
GPNMB-214ENST00000492858 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
GPNMB-214ENST00000492858 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
GPNMB-214ENST00000492858 SERPINB2P05120 415 aa16.64■□□□□ 0.25
GPNMB-214ENST00000492858 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
GPNMB-214ENST00000492858 H0YIN7 160 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
GPNMB-214ENST00000492858 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
GPNMB-214ENST00000492858 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
GPNMB-214ENST00000492858 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
GPNMB-214ENST00000492858 COL15A1P39059 1388 aa16.61■□□□□ 0.25
GPNMB-214ENST00000492858 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
GPNMB-214ENST00000492858 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
GPNMB-214ENST00000492858 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
GPNMB-214ENST00000492858 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
GPNMB-214ENST00000492858 ZNF622Q969S3 477 aaKnown RBP eCLIP16.6■□□□□ 0.25
GPNMB-214ENST00000492858 BCL2L12Q9HB09 334 aa16.6■□□□□ 0.25
GPNMB-214ENST00000492858 C21orf2O43822 256 aa16.59■□□□□ 0.25
GPNMB-214ENST00000492858 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
GPNMB-214ENST00000492858 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
GPNMB-214ENST00000492858 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
GPNMB-214ENST00000492858 VEGFBP49765 207 aa16.58■□□□□ 0.24
GPNMB-214ENST00000492858 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
GPNMB-214ENST00000492858 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
GPNMB-214ENST00000492858 LBX1P52954 281 aa16.57■□□□□ 0.24
GPNMB-214ENST00000492858 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 SLC52A2Q9HAB3 445 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 WBP1LQ9NX94 342 aa16.56■□□□□ 0.24
GPNMB-214ENST00000492858 TMEM88BA6NKF7 163 aa16.55■□□□□ 0.24
GPNMB-214ENST00000492858 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
GPNMB-214ENST00000492858 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
GPNMB-214ENST00000492858 PDE6BP35913 854 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 CCDC24Q8N4L8 307 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 ABHD8Q96I13 439 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
GPNMB-214ENST00000492858 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
GPNMB-214ENST00000492858 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
GPNMB-214ENST00000492858 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
GPNMB-214ENST00000492858 HSPA8P11142 646 aaKnown RBP16.52■□□□□ 0.24
GPNMB-214ENST00000492858 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
GPNMB-214ENST00000492858 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
GPNMB-214ENST00000492858 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
GPNMB-214ENST00000492858 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
GPNMB-214ENST00000492858 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
GPNMB-214ENST00000492858 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
GPNMB-214ENST00000492858 L3MBTL3Q96JM7 780 aaPredicted RBP16.51■□□□□ 0.23
GPNMB-214ENST00000492858 MRC1P22897 1456 aa16.5■□□□□ 0.23
GPNMB-214ENST00000492858 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
GPNMB-214ENST00000492858 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
GPNMB-214ENST00000492858 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
GPNMB-214ENST00000492858 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
GPNMB-214ENST00000492858 A0A087WZG4 1122 aa16.49■□□□□ 0.23
GPNMB-214ENST00000492858 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
GPNMB-214ENST00000492858 ANKRD31Q8N7Z5 1873 aa16.49■□□□□ 0.23
GPNMB-214ENST00000492858 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
GPNMB-214ENST00000492858 CLEC11AQ9Y240 323 aa16.49■□□□□ 0.23
GPNMB-214ENST00000492858 RASSF10A6NK89 507 aa16.48■□□□□ 0.23
GPNMB-214ENST00000492858 NPHP1O15259 732 aa16.48■□□□□ 0.23
GPNMB-214ENST00000492858 STARD3NLO95772 234 aa16.48■□□□□ 0.23
GPNMB-214ENST00000492858 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
GPNMB-214ENST00000492858 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
GPNMB-214ENST00000492858 MAP2K1Q02750 393 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-214ENST00000492858 MLLT1Q03111 559 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-214ENST00000492858 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
GPNMB-214ENST00000492858 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
GPNMB-214ENST00000492858 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
GPNMB-214ENST00000492858 ZNF330Q9Y3S2 320 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-214ENST00000492858 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 SRGNP10124 158 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 IL13P35225 146 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 PCDH10Q9P2E7 1040 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
GPNMB-214ENST00000492858 VIRMAQ69YN4 1812 aaKnown RBP16.46■□□□□ 0.23
GPNMB-214ENST00000492858 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
GPNMB-214ENST00000492858 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 EPHX2P34913 555 aa16.45■□□□□ 0.22
GPNMB-214ENST00000492858 ST5P78524 1137 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms