RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 SOS1Q07889 1333 aaPredicted RBP18.76■□□□□ 0.59
GPNMB-213ENST00000492512 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
GPNMB-213ENST00000492512 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
GPNMB-213ENST00000492512 DLEC1Q9Y238 1755 aa18.76■□□□□ 0.59
GPNMB-213ENST00000492512 GLTPD2A6NH11 291 aa18.75■□□□□ 0.59
GPNMB-213ENST00000492512 NFIXQ14938 502 aa18.75■□□□□ 0.59
GPNMB-213ENST00000492512 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
GPNMB-213ENST00000492512 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
GPNMB-213ENST00000492512 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
GPNMB-213ENST00000492512 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
GPNMB-213ENST00000492512 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
GPNMB-213ENST00000492512 TTLL6Q8N841 843 aa18.74■□□□□ 0.59
GPNMB-213ENST00000492512 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
GPNMB-213ENST00000492512 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
GPNMB-213ENST00000492512 COL15A1P39059 1388 aa18.73■□□□□ 0.59
GPNMB-213ENST00000492512 CYP19A1P11511 503 aaPredicted RBP18.73■□□□□ 0.59
GPNMB-213ENST00000492512 SERPINB2P05120 415 aa18.72■□□□□ 0.59
GPNMB-213ENST00000492512 PRELPP51888 382 aa18.72■□□□□ 0.59
GPNMB-213ENST00000492512 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
GPNMB-213ENST00000492512 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
GPNMB-213ENST00000492512 IL13P35225 146 aa18.71■□□□□ 0.59
GPNMB-213ENST00000492512 SLC39A6Q13433 755 aa18.71■□□□□ 0.59
GPNMB-213ENST00000492512 C2CD5Q86YS7 1000 aa18.71■□□□□ 0.59
GPNMB-213ENST00000492512 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
GPNMB-213ENST00000492512 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
GPNMB-213ENST00000492512 H0YIN7 160 aa18.7■□□□□ 0.58
GPNMB-213ENST00000492512 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
GPNMB-213ENST00000492512 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
GPNMB-213ENST00000492512 MRC1P22897 1456 aa18.69■□□□□ 0.58
GPNMB-213ENST00000492512 NFKBIEO00221 500 aa18.68■□□□□ 0.58
GPNMB-213ENST00000492512 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
GPNMB-213ENST00000492512 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
GPNMB-213ENST00000492512 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
GPNMB-213ENST00000492512 BICDL1Q6ZP65 573 aa18.67■□□□□ 0.58
GPNMB-213ENST00000492512 VSIG10Q8N0Z9 540 aa18.67■□□□□ 0.58
GPNMB-213ENST00000492512 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
GPNMB-213ENST00000492512 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
GPNMB-213ENST00000492512 DICER1Q9UPY3 1922 aaKnown RBP18.66■□□□□ 0.58
GPNMB-213ENST00000492512 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
GPNMB-213ENST00000492512 HMOX1P09601 288 aa18.65■□□□□ 0.58
GPNMB-213ENST00000492512 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.58
GPNMB-213ENST00000492512 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
GPNMB-213ENST00000492512 UBR2Q8IWV8 1755 aa18.64■□□□□ 0.57
GPNMB-213ENST00000492512 POTECB2RU33 542 aa18.64■□□□□ 0.57
GPNMB-213ENST00000492512 STARD3NLO95772 234 aa18.64■□□□□ 0.57
GPNMB-213ENST00000492512 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
GPNMB-213ENST00000492512 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
GPNMB-213ENST00000492512 FER1L6Q2WGJ9 1857 aa18.64■□□□□ 0.57
GPNMB-213ENST00000492512 A0A087WZG4 1122 aa18.63■□□□□ 0.57
GPNMB-213ENST00000492512 C21orf2O43822 256 aa18.63■□□□□ 0.57
GPNMB-213ENST00000492512 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
GPNMB-213ENST00000492512 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
GPNMB-213ENST00000492512 PDE6BP35913 854 aa18.62■□□□□ 0.57
GPNMB-213ENST00000492512 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
GPNMB-213ENST00000492512 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
GPNMB-213ENST00000492512 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
GPNMB-213ENST00000492512 TBC1D9BQ66K14 1250 aa18.61■□□□□ 0.57
GPNMB-213ENST00000492512 BRIP1Q9BX63 1249 aa18.61■□□□□ 0.57
GPNMB-213ENST00000492512 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
GPNMB-213ENST00000492512 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
GPNMB-213ENST00000492512 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
GPNMB-213ENST00000492512 CACNA1SQ13698 1873 aa18.6■□□□□ 0.57
GPNMB-213ENST00000492512 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
GPNMB-213ENST00000492512 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
GPNMB-213ENST00000492512 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
GPNMB-213ENST00000492512 CREBZFQ9NS37 354 aa18.59■□□□□ 0.57
GPNMB-213ENST00000492512 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
GPNMB-213ENST00000492512 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
GPNMB-213ENST00000492512 NPHP1O15259 732 aa18.58■□□□□ 0.56
GPNMB-213ENST00000492512 TAOK3Q9H2K8 898 aa18.58■□□□□ 0.56
GPNMB-213ENST00000492512 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
GPNMB-213ENST00000492512 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
GPNMB-213ENST00000492512 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
GPNMB-213ENST00000492512 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
GPNMB-213ENST00000492512 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
GPNMB-213ENST00000492512 SLX4Q8IY92 1834 aa18.56■□□□□ 0.56
GPNMB-213ENST00000492512 DIAPH1O60610 1272 aaKnown RBP18.56■□□□□ 0.56
GPNMB-213ENST00000492512 DDNO94850 711 aaPredicted RBP18.56■□□□□ 0.56
GPNMB-213ENST00000492512 TEFQ10587 303 aa18.56■□□□□ 0.56
GPNMB-213ENST00000492512 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
GPNMB-213ENST00000492512 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
GPNMB-213ENST00000492512 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
GPNMB-213ENST00000492512 ZNF790Q6PG37 636 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
GPNMB-213ENST00000492512 ST5P78524 1137 aa18.54■□□□□ 0.56
GPNMB-213ENST00000492512 SOGA3Q5TF21 947 aa18.54■□□□□ 0.56
GPNMB-213ENST00000492512 PRPF40BQ6NWY9 871 aaKnown RBP18.54■□□□□ 0.56
GPNMB-213ENST00000492512 ARFGEF2Q9Y6D5 1785 aa18.53■□□□□ 0.56
GPNMB-213ENST00000492512 IQCA1LA6NCM1 817 aa18.53■□□□□ 0.56
GPNMB-213ENST00000492512 STYK1Q6J9G0 422 aa18.53■□□□□ 0.56
GPNMB-213ENST00000492512 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
GPNMB-213ENST00000492512 SIPA1L3O60292 1781 aaPredicted RBP18.53■□□□□ 0.56
GPNMB-213ENST00000492512 SCN4AP35499 1836 aa18.52■□□□□ 0.56
GPNMB-213ENST00000492512 MASTLQ96GX5 879 aa18.52■□□□□ 0.56
GPNMB-213ENST00000492512 CNTNAP1P78357 1384 aa18.52■□□□□ 0.55
GPNMB-213ENST00000492512 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms