RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
ATF3-209ENST00000492118 FKBP8Q14318 412 aa13.79□□□□□ -0.2
ATF3-209ENST00000492118 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
ATF3-209ENST00000492118 BCL9O00512 1426 aa13.79□□□□□ -0.2
ATF3-209ENST00000492118 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 GIGYF1O75420 1035 aaPredicted RBP13.78□□□□□ -0.2
ATF3-209ENST00000492118 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
ATF3-209ENST00000492118 FMNL2Q96PY5 1086 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
ATF3-209ENST00000492118 RGS12O14924 1447 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 MYL6BP14649 208 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
ATF3-209ENST00000492118 MRC1P22897 1456 aa13.78□□□□□ -0.2
ATF3-209ENST00000492118 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
ATF3-209ENST00000492118 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
ATF3-209ENST00000492118 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
ATF3-209ENST00000492118 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
ATF3-209ENST00000492118 G2E3Q7L622 706 aa13.76□□□□□ -0.21
ATF3-209ENST00000492118 SNRPA1P09661 255 aaKnown RBP13.75□□□□□ -0.21
ATF3-209ENST00000492118 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
ATF3-209ENST00000492118 PANK1Q8TE04 598 aa13.75□□□□□ -0.21
ATF3-209ENST00000492118 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
ATF3-209ENST00000492118 STK31Q9BXU1 1019 aa13.75□□□□□ -0.21
ATF3-209ENST00000492118 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
ATF3-209ENST00000492118 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
ATF3-209ENST00000492118 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
ATF3-209ENST00000492118 MRPL50Q8N5N7 158 aaKnown RBP13.75□□□□□ -0.21
ATF3-209ENST00000492118 A1BGP04217 495 aa13.74□□□□□ -0.21
ATF3-209ENST00000492118 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
ATF3-209ENST00000492118 FAM196AQ6ZSG2 479 aa13.74□□□□□ -0.21
ATF3-209ENST00000492118 C5P01031 1676 aa13.74□□□□□ -0.21
ATF3-209ENST00000492118 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
ATF3-209ENST00000492118 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
ATF3-209ENST00000492118 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
ATF3-209ENST00000492118 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATF3-209ENST00000492118 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 F6X3S4 739 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 RLBP1P12271 317 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 IGSF3O75054 1194 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 TRIM27P14373 513 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 SIK1P57059 783 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
ATF3-209ENST00000492118 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.21
ATF3-209ENST00000492118 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
ATF3-209ENST00000492118 SLC4A10Q6U841 1118 aa13.71□□□□□ -0.21
ATF3-209ENST00000492118 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.21
ATF3-209ENST00000492118 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.71□□□□□ -0.21
ATF3-209ENST00000492118 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
ATF3-209ENST00000492118 BTAF1O14981 1849 aa13.71□□□□□ -0.22
ATF3-209ENST00000492118 SBF2Q86WG5 1849 aa13.71□□□□□ -0.22
ATF3-209ENST00000492118 ITPK1Q13572 414 aa13.7□□□□□ -0.22
ATF3-209ENST00000492118 EXOC6Q8TAG9 804 aa13.7□□□□□ -0.22
ATF3-209ENST00000492118 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
ATF3-209ENST00000492118 FLIIQ13045 1269 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 ATF7IPQ6VMQ6 1270 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 DBF4Q9UBU7 674 aaPredicted RBP13.69□□□□□ -0.22
ATF3-209ENST00000492118 PAPPAQ13219 1627 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 KIF16BQ96L93 1317 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 APBA3O96018 575 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 PDIA6Q15084 440 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 NBPF10Q6P3W6 841 aaKnown RBP13.69□□□□□ -0.22
ATF3-209ENST00000492118 NBPF15Q8N660 670 aa13.69□□□□□ -0.22
ATF3-209ENST00000492118 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
ATF3-209ENST00000492118 HOXB7P09629 217 aa13.68□□□□□ -0.22
ATF3-209ENST00000492118 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
ATF3-209ENST00000492118 SMARCC1Q92922 1105 aaPredicted RBP13.68□□□□□ -0.22
ATF3-209ENST00000492118 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
ATF3-209ENST00000492118 STARD3NLO95772 234 aa13.67□□□□□ -0.22
ATF3-209ENST00000492118 COPS6Q7L5N1 327 aa13.67□□□□□ -0.22
ATF3-209ENST00000492118 DZIP1LQ8IYY4 767 aaKnown RBP13.67□□□□□ -0.22
ATF3-209ENST00000492118 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
ATF3-209ENST00000492118 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
ATF3-209ENST00000492118 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
ATF3-209ENST00000492118 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
ATF3-209ENST00000492118 ZBTB1Q9Y2K1 713 aa13.67□□□□□ -0.22
ATF3-209ENST00000492118 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
ATF3-209ENST00000492118 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
ATF3-209ENST00000492118 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
ATF3-209ENST00000492118 DDX21Q9NR30 783 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATF3-209ENST00000492118 PI4KAP2A4QPH2 592 aa13.66□□□□□ -0.22
ATF3-209ENST00000492118 PI4KAP1Q8N8J0 262 aa13.66□□□□□ -0.22
ATF3-209ENST00000492118 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
ATF3-209ENST00000492118 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
ATF3-209ENST00000492118 LRRC4BQ9NT99 713 aa13.65□□□□□ -0.22
ATF3-209ENST00000492118 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
ATF3-209ENST00000492118 PHF14O94880 888 aa13.64□□□□□ -0.23
ATF3-209ENST00000492118 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
ATF3-209ENST00000492118 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
ATF3-209ENST00000492118 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
ATF3-209ENST00000492118 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
ATF3-209ENST00000492118 TEX13AQ9BXU3 409 aaPredicted RBP13.63□□□□□ -0.23
ATF3-209ENST00000492118 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
ATF3-209ENST00000492118 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
ATF3-209ENST00000492118 API5Q9BZZ5 524 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms