RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 USP17L21D6R901 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 CLDN10P78369 228 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 ZFAND3Q9H8U3 227 aa12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 PCF11O94913 1555 aaKnown RBP12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
FNDC3B-211ENST00000490832 LARGE2Q8N3Y3 721 aa12.36□□□□□ -0.43
FNDC3B-211ENST00000490832 ARXQ96QS3 562 aa12.36□□□□□ -0.43
FNDC3B-211ENST00000490832 PCDHGA11Q9Y5H2 935 aa12.36□□□□□ -0.43
FNDC3B-211ENST00000490832 LMTK3Q96Q04 1460 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 DGAT1O75907 488 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 AVPP01185 164 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 ADH1AP07327 375 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 HSPA2P54652 639 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 PSME1Q06323 249 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 PTK7Q13308 1070 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 ELOAQ14241 798 aaKnown RBP12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 PKDCCQ504Y2 493 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 CRTC2Q53ET0 693 aaPredicted RBP12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 EFCAB2Q5VUJ9 269 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 Q6ZVU0 165 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 ARHGAP5Q13017 1502 aa12.35□□□□□ -0.43
FNDC3B-211ENST00000490832 SIX5Q8N196 739 aa12.34□□□□□ -0.43
FNDC3B-211ENST00000490832 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
FNDC3B-211ENST00000490832 CBLBQ13191 982 aa12.33□□□□□ -0.44
FNDC3B-211ENST00000490832 AFAP1Q8N556 730 aa12.33□□□□□ -0.44
FNDC3B-211ENST00000490832 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
FNDC3B-211ENST00000490832 CLIP1P30622 1438 aa12.33□□□□□ -0.44
FNDC3B-211ENST00000490832 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
FNDC3B-211ENST00000490832 CAPN5O15484 640 aaPredicted RBP12.32□□□□□ -0.44
FNDC3B-211ENST00000490832 NOVA2Q9UNW9 492 aaKnown RBP12.32□□□□□ -0.44
FNDC3B-211ENST00000490832 KIAA1024Q9UPX6 916 aa12.32□□□□□ -0.44
FNDC3B-211ENST00000490832 MAGI2Q86UL8 1455 aa12.32□□□□□ -0.44
FNDC3B-211ENST00000490832 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 CASKIN1Q8WXD9 1431 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 ZBTB7BO15156 539 aaPredicted RBP12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 GNRH1P01148 92 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 ANKMY2Q8IV38 441 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 HOMEZQ8IX15 550 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 ATP10AO60312 1499 aa12.31□□□□□ -0.44
FNDC3B-211ENST00000490832 C9orf84Q5VXU9 1444 aa12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 CEBPAP49715 358 aaPredicted RBP12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
FNDC3B-211ENST00000490832 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
FNDC3B-211ENST00000490832 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
FNDC3B-211ENST00000490832 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 ZNF518AQ6AHZ1 1483 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 KDM5CP41229 1560 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 GDF10P55107 478 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 DPYDQ12882 1025 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 FAM200AQ8TCP9 573 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 PREX2Q70Z35 1606 aa12.28□□□□□ -0.44
FNDC3B-211ENST00000490832 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.44
FNDC3B-211ENST00000490832 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.44
FNDC3B-211ENST00000490832 ABCA6Q8N139 1617 aa12.27□□□□□ -0.44
FNDC3B-211ENST00000490832 WASLO00401 505 aaPredicted RBP12.27□□□□□ -0.45
FNDC3B-211ENST00000490832 DKK1O94907 266 aa12.27□□□□□ -0.45
FNDC3B-211ENST00000490832 SCNN1DP51172 638 aa12.27□□□□□ -0.45
FNDC3B-211ENST00000490832 USTQ9Y2C2 406 aa12.27□□□□□ -0.45
FNDC3B-211ENST00000490832 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 PTGIRP43119 386 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 SEC13P55735 322 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 PDE4CQ08493 712 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 FYCO1Q9BQS8 1478 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 ABCC1P33527 1531 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 ITSN2Q9NZM3 1697 aa12.26□□□□□ -0.45
FNDC3B-211ENST00000490832 TMEM229AB2RXF0 380 aa12.25□□□□□ -0.45
FNDC3B-211ENST00000490832 UPP2O95045 317 aa12.25□□□□□ -0.45
FNDC3B-211ENST00000490832 RELBQ01201 579 aa12.25□□□□□ -0.45
FNDC3B-211ENST00000490832 STK32AQ8WU08 396 aa12.25□□□□□ -0.45
FNDC3B-211ENST00000490832 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
FNDC3B-211ENST00000490832 M0R2N6 131 aa12.24□□□□□ -0.45
FNDC3B-211ENST00000490832 AXIN1O15169 862 aa12.24□□□□□ -0.45
FNDC3B-211ENST00000490832 INHAP05111 366 aa12.24□□□□□ -0.45
FNDC3B-211ENST00000490832 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
FNDC3B-211ENST00000490832 RAB6BQ9NRW1 208 aa12.24□□□□□ -0.45
FNDC3B-211ENST00000490832 BACH1O14867 736 aa12.23□□□□□ -0.45
FNDC3B-211ENST00000490832 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
FNDC3B-211ENST00000490832 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
FNDC3B-211ENST00000490832 ZNF358Q9NW07 568 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms