RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
RIPPLY3-203ENST00000490393 UBTFL1P0CB47 393 aaPredicted RBP16.95■□□□□ 0.3
RIPPLY3-203ENST00000490393 SEC24BO95487 1268 aa16.94■□□□□ 0.3
RIPPLY3-203ENST00000490393 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
RIPPLY3-203ENST00000490393 ANXA1P04083 346 aa16.94■□□□□ 0.3
RIPPLY3-203ENST00000490393 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 C5P01031 1676 aa16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 TOM1O60784 492 aa16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
RIPPLY3-203ENST00000490393 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 LRP10Q7Z4F1 713 aa16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
RIPPLY3-203ENST00000490393 ERBB4Q15303 1308 aa16.91■□□□□ 0.3
RIPPLY3-203ENST00000490393 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
RIPPLY3-203ENST00000490393 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
RIPPLY3-203ENST00000490393 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 POLA2Q14181 598 aa16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 UTYO14607 1347 aa16.9■□□□□ 0.3
RIPPLY3-203ENST00000490393 GLI3P10071 1580 aa16.89■□□□□ 0.3
RIPPLY3-203ENST00000490393 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
RIPPLY3-203ENST00000490393 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 MTX1Q13505 466 aa16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 TBC1D32Q96NH3 1257 aa16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
RIPPLY3-203ENST00000490393 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
RIPPLY3-203ENST00000490393 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
RIPPLY3-203ENST00000490393 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
RIPPLY3-203ENST00000490393 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
RIPPLY3-203ENST00000490393 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 TTC22Q5TAA0 569 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 LRRCC1Q9C099 1032 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
RIPPLY3-203ENST00000490393 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
RIPPLY3-203ENST00000490393 MYL6BP14649 208 aa16.85■□□□□ 0.29
RIPPLY3-203ENST00000490393 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
RIPPLY3-203ENST00000490393 EXOC5O00471 708 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 NEXNQ0ZGT2 675 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 TMOD3Q9NYL9 352 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 EXOC6BQ9Y2D4 811 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 GRM8O00222 908 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 VSIG10Q8N0Z9 540 aa16.84■□□□□ 0.29
RIPPLY3-203ENST00000490393 LRP6O75581 1613 aa16.83■□□□□ 0.29
RIPPLY3-203ENST00000490393 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
RIPPLY3-203ENST00000490393 TEX13AQ9BXU3 409 aaPredicted RBP16.83■□□□□ 0.28
RIPPLY3-203ENST00000490393 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
RIPPLY3-203ENST00000490393 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 PLBD2Q8NHP8 589 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 NBPF26B4DH59 902 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 NBPF15Q8N660 670 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 PIGBQ92521 554 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
RIPPLY3-203ENST00000490393 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
RIPPLY3-203ENST00000490393 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
RIPPLY3-203ENST00000490393 PDE1AP54750 535 aa16.81■□□□□ 0.28
RIPPLY3-203ENST00000490393 COL15A1P39059 1388 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 APBB1O00213 710 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 CDC45O75419 566 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 GCKRQ14397 625 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 C22orf23Q9BZE7 217 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 NWD2Q9ULI1 1742 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 TBC1D9Q6ZT07 1266 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
RIPPLY3-203ENST00000490393 ITGB4P16144 1822 aa16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
RIPPLY3-203ENST00000490393 MYD88Q99836 296 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms