RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 PPLO60437 1756 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 FOXN1O15353 648 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 CPDO75976 1380 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 ROCK1Q13464 1354 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 PPP1R15BQ5SWA1 713 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 SMC1BQ8NDV3 1235 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 ADAMTS19Q8TE59 1207 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 CDCA7Q9BWT1 371 aaPredicted RBP6.12□□□□□ -1.43
RTN1-207ENST00000490111 YTHDC2Q9H6S0 1430 aaKnown RBP6.12□□□□□ -1.43
RTN1-207ENST00000490111 POLR3EQ9NVU0 708 aa6.12□□□□□ -1.43
RTN1-207ENST00000490111 NHSQ6T4R5 1651 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 ADGRF5Q8IZF2 1346 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 IGSF1Q8N6C5 1336 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 CCDC85CA6NKD9 419 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 EXOC5O00471 708 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 ABL2P42684 1182 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 NOM1Q5C9Z4 860 aaKnown RBP6.11□□□□□ -1.43
RTN1-207ENST00000490111 SLC27A3Q5K4L6 730 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 TOM1L2Q6ZVM7 507 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 ACSBG1Q96GR2 724 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 MS4A4AQ96JQ5 239 aa6.11□□□□□ -1.43
RTN1-207ENST00000490111 CICQ96RK0 1608 aaPredicted RBP6.1□□□□□ -1.43
RTN1-207ENST00000490111 CLCN1P35523 988 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 CTCFP49711 727 aaPredicted RBP6.1□□□□□ -1.43
RTN1-207ENST00000490111 SAFB2Q14151 953 aaKnown RBP eCLIP6.1□□□□□ -1.43
RTN1-207ENST00000490111 TMEM259Q4ZIN3 620 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 MYSM1Q5VVJ2 828 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 MSL1Q68DK7 614 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
RTN1-207ENST00000490111 TUBGCP6Q96RT7 1819 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 WNK3Q9BYP7 1800 aa6.1□□□□□ -1.43
RTN1-207ENST00000490111 KDM2BQ8NHM5 1336 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 PRR36Q9H6K5 1346 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 CLSTN1O94985 981 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 CLK2P49760 499 aaKnown RBP6.09□□□□□ -1.43
RTN1-207ENST00000490111 SF3A1Q15459 793 aaKnown RBP6.09□□□□□ -1.43
RTN1-207ENST00000490111 NOL8Q76FK4 1167 aaKnown RBP6.09□□□□□ -1.43
RTN1-207ENST00000490111 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
RTN1-207ENST00000490111 PRAM1Q96QH2 718 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 TBC1D2BQ9UPU7 963 aa6.09□□□□□ -1.43
RTN1-207ENST00000490111 BTAF1O14981 1849 aa6.09□□□□□ -1.44
RTN1-207ENST00000490111 USP6P35125 1406 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 C10orf71Q711Q0 1435 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 EIF3AQ14152 1382 aaKnown RBP6.08□□□□□ -1.44
RTN1-207ENST00000490111 ATG7O95352 703 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 GCP02774 474 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 OSBPP22059 807 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 VAMP1P23763 118 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 SSTR3P32745 418 aaPredicted RBP6.08□□□□□ -1.44
RTN1-207ENST00000490111 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 GIMAP6Q6P9H5 292 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 ZNF579Q8NAF0 562 aaKnown RBP6.08□□□□□ -1.44
RTN1-207ENST00000490111 AIDAQ96BJ3 306 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 BEGAINQ9BUH8 593 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 PPP1R12CQ9BZL4 782 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 CABP2Q9NPB3 220 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 GPCPD1Q9NPB8 672 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 POGKQ9P215 609 aa6.08□□□□□ -1.44
RTN1-207ENST00000490111 GOLGB1Q14789 3259 aaKnown RBP6.07□□□□□ -1.44
RTN1-207ENST00000490111 TRPM1Q7Z4N2 1603 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 GRXCR2A6NFK2 248 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 MARCH6O60337 910 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 LBX1P52954 281 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 KCNQ4P56696 695 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 PPP2R2DQ66LE6 453 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 ARHGAP27Q6ZUM4 889 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 ABTB2Q8N961 1025 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 GIPC2Q8TF65 315 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 PRDM16Q9HAZ2 1276 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 PXDNLA1KZ92 1463 aa6.07□□□□□ -1.44
RTN1-207ENST00000490111 PLEKHG2Q9H7P9 1386 aa6.06□□□□□ -1.44
RTN1-207ENST00000490111 WDR17Q8IZU2 1322 aa6.06□□□□□ -1.44
RTN1-207ENST00000490111 KCPQ6ZWJ8 1503 aa6.06□□□□□ -1.44
RTN1-207ENST00000490111 CARD10Q9BWT7 1032 aa6.06□□□□□ -1.44
RTN1-207ENST00000490111 MKRN1Q9UHC7 482 aaKnown RBP6.06□□□□□ -1.44
RTN1-207ENST00000490111 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
RTN1-207ENST00000490111 TNRC6CQ9HCJ0 1690 aaKnown RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
RTN1-207ENST00000490111 WASLO00401 505 aaPredicted RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 MDM2Q00987 491 aaPredicted RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 C9orf131Q5VYM1 1079 aa6.05□□□□□ -1.44
RTN1-207ENST00000490111 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
RTN1-207ENST00000490111 NLRP13Q86W25 1043 aa6.05□□□□□ -1.44
RTN1-207ENST00000490111 CCER1Q8TC90 406 aaPredicted RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 C14orf93Q9H972 538 aaKnown RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 PRM3Q9NNZ6 103 aa6.05□□□□□ -1.44
RTN1-207ENST00000490111 GPHNQ9NQX3 736 aaPredicted RBP6.05□□□□□ -1.44
RTN1-207ENST00000490111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.05□□□□□ -1.44
RTN1-207ENST00000490111 PIK3C2AO00443 1686 aa6.04□□□□□ -1.44
RTN1-207ENST00000490111 PALM3A6NDB9 673 aaPredicted RBP6.04□□□□□ -1.44
RTN1-207ENST00000490111 PTGDRQ13258 359 aa6.04□□□□□ -1.44
RTN1-207ENST00000490111 TBC1D2Q9BYX2 928 aa6.04□□□□□ -1.44
RTN1-207ENST00000490111 BCS1LQ9Y276 419 aa6.04□□□□□ -1.44
RTN1-207ENST00000490111 AXIN2Q9Y2T1 843 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms