RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 TM4SF1P30408 202 aa15.8■□□□□ 0.12
SEMA6C-208ENST00000489944 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
SEMA6C-208ENST00000489944 PXDNLA1KZ92 1463 aa15.79■□□□□ 0.12
SEMA6C-208ENST00000489944 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
SEMA6C-208ENST00000489944 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
SEMA6C-208ENST00000489944 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
SEMA6C-208ENST00000489944 PDZRN3Q9UPQ7 1066 aa15.79■□□□□ 0.12
SEMA6C-208ENST00000489944 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
SEMA6C-208ENST00000489944 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
SEMA6C-208ENST00000489944 EIF5P55010 431 aaKnown RBP15.78■□□□□ 0.12
SEMA6C-208ENST00000489944 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
SEMA6C-208ENST00000489944 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
SEMA6C-208ENST00000489944 FKBP8Q14318 412 aa15.77■□□□□ 0.12
SEMA6C-208ENST00000489944 ZBTB1Q9Y2K1 713 aa15.77■□□□□ 0.12
SEMA6C-208ENST00000489944 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
SEMA6C-208ENST00000489944 USPL1Q5W0Q7 1092 aa15.76■□□□□ 0.11
SEMA6C-208ENST00000489944 PIM2Q9P1W9 311 aa15.76■□□□□ 0.11
SEMA6C-208ENST00000489944 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
SEMA6C-208ENST00000489944 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
SEMA6C-208ENST00000489944 ADCY9O60503 1353 aa15.75■□□□□ 0.11
SEMA6C-208ENST00000489944 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
SEMA6C-208ENST00000489944 TAF7Q15545 349 aaPredicted RBP15.74■□□□□ 0.11
SEMA6C-208ENST00000489944 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
SEMA6C-208ENST00000489944 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
SEMA6C-208ENST00000489944 DDR1Q08345 913 aa15.73■□□□□ 0.11
SEMA6C-208ENST00000489944 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
SEMA6C-208ENST00000489944 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 DPEP1P16444 411 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 NFIXQ14938 502 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 BABAM1Q9NWV8 329 aa15.72■□□□□ 0.11
SEMA6C-208ENST00000489944 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
SEMA6C-208ENST00000489944 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
SEMA6C-208ENST00000489944 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
SEMA6C-208ENST00000489944 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
SEMA6C-208ENST00000489944 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.1
SEMA6C-208ENST00000489944 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 SERPINB2P05120 415 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 KCNA3P22001 575 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 C1QTNF8P60827 252 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 BCL2L12Q9HB09 334 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 ZNF652Q9Y2D9 606 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
SEMA6C-208ENST00000489944 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
SEMA6C-208ENST00000489944 MCM10Q7L590 875 aa15.69■□□□□ 0.1
SEMA6C-208ENST00000489944 GPBP1L1Q9HC44 474 aaPredicted RBP15.69■□□□□ 0.1
SEMA6C-208ENST00000489944 SCN7AQ01118 1682 aa15.69■□□□□ 0.1
SEMA6C-208ENST00000489944 N4BP2Q86UW6 1770 aaPredicted RBP15.69■□□□□ 0.1
SEMA6C-208ENST00000489944 ZC3H4Q9UPT8 1303 aaKnown RBP15.68■□□□□ 0.1
SEMA6C-208ENST00000489944 PDE6BP35913 854 aa15.67■□□□□ 0.1
SEMA6C-208ENST00000489944 SETDB2Q96T68 719 aa15.67■□□□□ 0.1
SEMA6C-208ENST00000489944 BRIP1Q9BX63 1249 aa15.67■□□□□ 0.1
SEMA6C-208ENST00000489944 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
SEMA6C-208ENST00000489944 H0YIN7 160 aa15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 A1BGP04217 495 aa15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 DZIP3Q86Y13 1208 aaKnown RBP15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
SEMA6C-208ENST00000489944 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
SEMA6C-208ENST00000489944 AFDNP55196 1824 aaKnown RBP15.65■□□□□ 0.1
SEMA6C-208ENST00000489944 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.1
SEMA6C-208ENST00000489944 KCNQ3O43525 872 aa15.64■□□□□ 0.09
SEMA6C-208ENST00000489944 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
SEMA6C-208ENST00000489944 TTLL6Q8N841 843 aa15.64■□□□□ 0.09
SEMA6C-208ENST00000489944 TBC1D2BQ9UPU7 963 aa15.64■□□□□ 0.09
SEMA6C-208ENST00000489944 DLG5Q8TDM6 1919 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 KDM3BQ7LBC6 1761 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 ST5P78524 1137 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 TBC1D9BQ66K14 1250 aa15.63■□□□□ 0.09
SEMA6C-208ENST00000489944 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 C2CD5Q86YS7 1000 aa15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 ZNF330Q9Y3S2 320 aaPredicted RBP15.62■□□□□ 0.09
SEMA6C-208ENST00000489944 CHRNA5P30532 468 aa15.61■□□□□ 0.09
SEMA6C-208ENST00000489944 EIF4A1P60842 406 aaKnown RBP15.61■□□□□ 0.09
SEMA6C-208ENST00000489944 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
SEMA6C-208ENST00000489944 PRR5LQ6MZQ0 368 aa15.61■□□□□ 0.09
SEMA6C-208ENST00000489944 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
SEMA6C-208ENST00000489944 NPHP1O15259 732 aa15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 RIPK4P57078 832 aa15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 STYK1Q6J9G0 422 aa15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 CNKSR1Q969H4 720 aa15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
SEMA6C-208ENST00000489944 NBPF26B4DH59 902 aa15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 NBPF10Q6P3W6 841 aaKnown RBP15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 BICDL1Q6ZP65 573 aa15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 NBPF15Q8N660 670 aa15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 NYXQ9GZU5 481 aa15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 PRKRIP1Q9H875 184 aaPredicted RBP15.59■□□□□ 0.09
SEMA6C-208ENST00000489944 WWC3Q9ULE0 1092 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms