RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
GTF3C5-210ENST00000489842 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.45
GTF3C5-210ENST00000489842 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
GTF3C5-210ENST00000489842 ADCY9O60503 1353 aa12.27□□□□□ -0.45
GTF3C5-210ENST00000489842 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
GTF3C5-210ENST00000489842 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
GTF3C5-210ENST00000489842 FCHSD2O94868 740 aa12.26□□□□□ -0.45
GTF3C5-210ENST00000489842 TM4SF1P30408 202 aa12.26□□□□□ -0.45
GTF3C5-210ENST00000489842 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
GTF3C5-210ENST00000489842 GNAT3A8MTJ3 354 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 NFIXQ14938 502 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 MCM10Q7L590 875 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 COL15A1P39059 1388 aa12.25□□□□□ -0.45
GTF3C5-210ENST00000489842 A1BGP04217 495 aa12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 TGFB2P61812 414 aa12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 TEFQ10587 303 aa12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
GTF3C5-210ENST00000489842 ZPR1O75312 459 aa12.23□□□□□ -0.45
GTF3C5-210ENST00000489842 ZNF790Q6PG37 636 aa12.23□□□□□ -0.45
GTF3C5-210ENST00000489842 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
GTF3C5-210ENST00000489842 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
GTF3C5-210ENST00000489842 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
GTF3C5-210ENST00000489842 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
GTF3C5-210ENST00000489842 MIS18AQ9NYP9 233 aa12.22□□□□□ -0.45
GTF3C5-210ENST00000489842 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
GTF3C5-210ENST00000489842 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
GTF3C5-210ENST00000489842 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
GTF3C5-210ENST00000489842 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 NRXN2Q9P2S2 1712 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 SERPINB2P05120 415 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 USP16Q9Y5T5 823 aa12.21□□□□□ -0.45
GTF3C5-210ENST00000489842 ANKRD31Q8N7Z5 1873 aa12.21□□□□□ -0.46
GTF3C5-210ENST00000489842 BTBD11A6QL63 1104 aa12.2□□□□□ -0.46
GTF3C5-210ENST00000489842 PRELPP51888 382 aa12.2□□□□□ -0.46
GTF3C5-210ENST00000489842 RASSF7Q02833 373 aa12.2□□□□□ -0.46
GTF3C5-210ENST00000489842 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
GTF3C5-210ENST00000489842 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
GTF3C5-210ENST00000489842 KIF3CO14782 793 aa12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
GTF3C5-210ENST00000489842 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 STARD3NLO95772 234 aa12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 SBF1O95248 1867 aa12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
GTF3C5-210ENST00000489842 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
GTF3C5-210ENST00000489842 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
GTF3C5-210ENST00000489842 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
GTF3C5-210ENST00000489842 CEP350Q5VT06 3117 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 BCORQ6W2J9 1755 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 RNF181Q9P0P0 153 aa12.16□□□□□ -0.46
GTF3C5-210ENST00000489842 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
GTF3C5-210ENST00000489842 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
GTF3C5-210ENST00000489842 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
GTF3C5-210ENST00000489842 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
GTF3C5-210ENST00000489842 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.471e-9■■■□□ 15.4
GTF3C5-210ENST00000489842 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 A0A087WZG4 1122 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 NFKBIEO00221 500 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 HTRA3P83110 453 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 HLFQ16534 295 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
GTF3C5-210ENST00000489842 H0YIN7 160 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 C21orf2O43822 256 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 HSPA6P17066 643 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
GTF3C5-210ENST00000489842 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
GTF3C5-210ENST00000489842 NFE2L2Q16236 605 aa12.1□□□□□ -0.47
GTF3C5-210ENST00000489842 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
GTF3C5-210ENST00000489842 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
GTF3C5-210ENST00000489842 SETDB2Q96T68 719 aa12.1□□□□□ -0.47
GTF3C5-210ENST00000489842 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms