RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 ZPR1O75312 459 aa17.65■□□□□ 0.42
LTA-216ENST00000489638 KDM2BQ8NHM5 1336 aa17.64■□□□□ 0.41
LTA-216ENST00000489638 HMOX1P09601 288 aa17.64■□□□□ 0.41
LTA-216ENST00000489638 NFIXQ14938 502 aa17.64■□□□□ 0.41
LTA-216ENST00000489638 NARFQ9UHQ1 456 aa17.64■□□□□ 0.41
LTA-216ENST00000489638 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
LTA-216ENST00000489638 AFDNP55196 1824 aaKnown RBP17.63■□□□□ 0.41
LTA-216ENST00000489638 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
LTA-216ENST00000489638 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
LTA-216ENST00000489638 SBF1O95248 1867 aa17.63■□□□□ 0.41
LTA-216ENST00000489638 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
LTA-216ENST00000489638 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
LTA-216ENST00000489638 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
LTA-216ENST00000489638 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
LTA-216ENST00000489638 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
LTA-216ENST00000489638 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
LTA-216ENST00000489638 RASSF7Q02833 373 aa17.61■□□□□ 0.41
LTA-216ENST00000489638 FSTL1Q12841 308 aa17.61■□□□□ 0.41
LTA-216ENST00000489638 HTRA3P83110 453 aa17.6■□□□□ 0.41
LTA-216ENST00000489638 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
LTA-216ENST00000489638 RRAGCQ9HB90 399 aa17.6■□□□□ 0.41
LTA-216ENST00000489638 CARMIL3Q8ND23 1372 aa17.59■□□□□ 0.41
LTA-216ENST00000489638 PRELPP51888 382 aa17.59■□□□□ 0.41
LTA-216ENST00000489638 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
LTA-216ENST00000489638 SERPINB2P05120 415 aa17.58■□□□□ 0.4
LTA-216ENST00000489638 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
LTA-216ENST00000489638 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.4
LTA-216ENST00000489638 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
LTA-216ENST00000489638 DIAPH1O60610 1272 aaKnown RBP17.57■□□□□ 0.4
LTA-216ENST00000489638 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
LTA-216ENST00000489638 JMYQ8N9B5 988 aa17.56■□□□□ 0.4
LTA-216ENST00000489638 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
LTA-216ENST00000489638 LMNB1P20700 586 aa17.55■□□□□ 0.4
LTA-216ENST00000489638 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
LTA-216ENST00000489638 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
LTA-216ENST00000489638 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
LTA-216ENST00000489638 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
LTA-216ENST00000489638 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
LTA-216ENST00000489638 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
LTA-216ENST00000489638 SMC1BQ8NDV3 1235 aa17.54■□□□□ 0.4
LTA-216ENST00000489638 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
LTA-216ENST00000489638 NFKBIEO00221 500 aa17.53■□□□□ 0.4
LTA-216ENST00000489638 STARD3NLO95772 234 aa17.53■□□□□ 0.4
LTA-216ENST00000489638 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
LTA-216ENST00000489638 ZNF496Q96IT1 587 aaPredicted RBP17.53■□□□□ 0.4
LTA-216ENST00000489638 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
LTA-216ENST00000489638 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
LTA-216ENST00000489638 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
LTA-216ENST00000489638 HEG1Q9ULI3 1381 aa17.52■□□□□ 0.4
LTA-216ENST00000489638 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.39
LTA-216ENST00000489638 A0A087WZG4 1122 aa17.52■□□□□ 0.39
LTA-216ENST00000489638 H0YIN7 160 aa17.52■□□□□ 0.39
LTA-216ENST00000489638 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.39
LTA-216ENST00000489638 IL17REQ8NFR9 667 aa17.52■□□□□ 0.39
LTA-216ENST00000489638 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
LTA-216ENST00000489638 VEGFAP15692 232 aaPredicted RBP17.5■□□□□ 0.39
LTA-216ENST00000489638 TEFQ10587 303 aa17.5■□□□□ 0.39
LTA-216ENST00000489638 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
LTA-216ENST00000489638 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
LTA-216ENST00000489638 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
LTA-216ENST00000489638 PRR5LQ6MZQ0 368 aa17.49■□□□□ 0.39
LTA-216ENST00000489638 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
LTA-216ENST00000489638 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
LTA-216ENST00000489638 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
LTA-216ENST00000489638 COL13A1Q5TAT6 717 aaPredicted RBP17.48■□□□□ 0.39
LTA-216ENST00000489638 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
LTA-216ENST00000489638 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
LTA-216ENST00000489638 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
LTA-216ENST00000489638 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
LTA-216ENST00000489638 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
LTA-216ENST00000489638 POTECB2RU33 542 aa17.47■□□□□ 0.39
LTA-216ENST00000489638 PDE6BP35913 854 aa17.47■□□□□ 0.39
LTA-216ENST00000489638 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
LTA-216ENST00000489638 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
LTA-216ENST00000489638 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
LTA-216ENST00000489638 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
LTA-216ENST00000489638 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
LTA-216ENST00000489638 C21orf2O43822 256 aa17.45■□□□□ 0.38
LTA-216ENST00000489638 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
LTA-216ENST00000489638 A1BGP04217 495 aa17.45■□□□□ 0.38
LTA-216ENST00000489638 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
LTA-216ENST00000489638 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
LTA-216ENST00000489638 KCNQ3O43525 872 aa17.44■□□□□ 0.38
LTA-216ENST00000489638 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
LTA-216ENST00000489638 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
LTA-216ENST00000489638 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
LTA-216ENST00000489638 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
LTA-216ENST00000489638 ERFEQ4G0M1 354 aa17.43■□□□□ 0.38
LTA-216ENST00000489638 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
LTA-216ENST00000489638 DPY19L2Q6NUT2 758 aa17.42■□□□□ 0.38
LTA-216ENST00000489638 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
LTA-216ENST00000489638 TAOK3Q9H2K8 898 aa17.42■□□□□ 0.38
LTA-216ENST00000489638 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
LTA-216ENST00000489638 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
LTA-216ENST00000489638 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
LTA-216ENST00000489638 STYK1Q6J9G0 422 aa17.41■□□□□ 0.38
LTA-216ENST00000489638 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
LTA-216ENST00000489638 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
LTA-216ENST00000489638 SLX4Q8IY92 1834 aa17.41■□□□□ 0.38
LTA-216ENST00000489638 SRGNP10124 158 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms