RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.28
TOP3B-217ENST00000489581 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
TOP3B-217ENST00000489581 NFIXQ14938 502 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 RRAGCQ9HB90 399 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 ZBTB1Q9Y2K1 713 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 KDM2BQ8NHM5 1336 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
TOP3B-217ENST00000489581 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
TOP3B-217ENST00000489581 MRC1P22897 1456 aa23.04■■□□□ 1.28
TOP3B-217ENST00000489581 COL15A1P39059 1388 aa23.03■■□□□ 1.28
TOP3B-217ENST00000489581 HTRA3P83110 453 aa23.03■■□□□ 1.28
TOP3B-217ENST00000489581 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 RASSF7Q02833 373 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 BCL2L12Q9HB09 334 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
TOP3B-217ENST00000489581 NRXN2Q9P2S2 1712 aa23.01■■□□□ 1.27
TOP3B-217ENST00000489581 SERPINB2P05120 415 aa23■■□□□ 1.27
TOP3B-217ENST00000489581 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
TOP3B-217ENST00000489581 FSTL1Q12841 308 aa23■■□□□ 1.27
TOP3B-217ENST00000489581 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
TOP3B-217ENST00000489581 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
TOP3B-217ENST00000489581 TNRC6CQ9HCJ0 1690 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
TOP3B-217ENST00000489581 UBR2Q8IWV8 1755 aa22.97■■□□□ 1.27
TOP3B-217ENST00000489581 BICDL1Q6ZP65 573 aa22.97■■□□□ 1.27
TOP3B-217ENST00000489581 C2CD5Q86YS7 1000 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 TTLL6Q8N841 843 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 KLRG1Q96E93 195 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
TOP3B-217ENST00000489581 PRELPP51888 382 aa22.95■■□□□ 1.26
TOP3B-217ENST00000489581 TTC5Q8N0Z6 440 aa22.95■■□□□ 1.26
TOP3B-217ENST00000489581 CARMIL3Q8ND23 1372 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 STARD3NLO95772 234 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 LMNB1P20700 586 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
TOP3B-217ENST00000489581 H0YIN7 160 aa22.93■■□□□ 1.26
TOP3B-217ENST00000489581 EIF5P55010 431 aaKnown RBP22.93■■□□□ 1.26
TOP3B-217ENST00000489581 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
TOP3B-217ENST00000489581 ZC3H4Q9UPT8 1303 aaKnown RBP22.92■■□□□ 1.26
TOP3B-217ENST00000489581 ZNF496Q96IT1 587 aaPredicted RBP22.92■■□□□ 1.26
TOP3B-217ENST00000489581 A0A087WZG4 1122 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
TOP3B-217ENST00000489581 TEFQ10587 303 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 ZNF330Q9Y3S2 320 aaPredicted RBP22.91■■□□□ 1.26
TOP3B-217ENST00000489581 ANKRD31Q8N7Z5 1873 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 CCDC24Q8N4L8 307 aa22.9■■□□□ 1.26
TOP3B-217ENST00000489581 JMYQ8N9B5 988 aa22.9■■□□□ 1.26
TOP3B-217ENST00000489581 TIAM2Q8IVF5 1701 aa22.89■■□□□ 1.26
TOP3B-217ENST00000489581 NFKBIEO00221 500 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF622Q969S3 477 aaKnown RBP eCLIP22.89■■□□□ 1.255e-19■■□□□ 13.6
TOP3B-217ENST00000489581 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF219Q9P2Y4 722 aaPredicted RBP22.88■■□□□ 1.25
TOP3B-217ENST00000489581 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
TOP3B-217ENST00000489581 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
TOP3B-217ENST00000489581 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
TOP3B-217ENST00000489581 PCNTO95613 3336 aa22.86■■□□□ 1.25
TOP3B-217ENST00000489581 A1BGP04217 495 aa22.86■■□□□ 1.25
TOP3B-217ENST00000489581 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
TOP3B-217ENST00000489581 SCN7AQ01118 1682 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 DICER1Q9UPY3 1922 aaKnown RBP22.85■■□□□ 1.25
TOP3B-217ENST00000489581 C21orf2O43822 256 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 BRIP1Q9BX63 1249 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 CACNA1SQ13698 1873 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 FER1L6Q2WGJ9 1857 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 PDE6BP35913 854 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 COL13A1Q5TAT6 717 aaPredicted RBP22.84■■□□□ 1.25
TOP3B-217ENST00000489581 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
TOP3B-217ENST00000489581 IL6STP40189 918 aaPredicted RBP22.83■■□□□ 1.25
TOP3B-217ENST00000489581 FMNL2Q96PY5 1086 aa22.83■■□□□ 1.25
TOP3B-217ENST00000489581 POTECB2RU33 542 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 KCNQ3O43525 872 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
TOP3B-217ENST00000489581 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 SLX4Q8IY92 1834 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 NPHP1O15259 732 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 ERFEQ4G0M1 354 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 SETDB2Q96T68 719 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 CAMTA2O94983 1202 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 PHACTR3Q96KR7 559 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
TOP3B-217ENST00000489581 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
TOP3B-217ENST00000489581 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 PIP4K2AP48426 406 aaPredicted RBP22.78■■□□□ 1.24
TOP3B-217ENST00000489581 DZIP3Q86Y13 1208 aaKnown RBP22.78■■□□□ 1.24
TOP3B-217ENST00000489581 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 BCORQ6W2J9 1755 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms