RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
LINC00173-204ENST00000489452 HSPA6P17066 643 aa17.99■□□□□ 0.47
LINC00173-204ENST00000489452 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
LINC00173-204ENST00000489452 STARD3NLO95772 234 aa17.98■□□□□ 0.47
LINC00173-204ENST00000489452 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
LINC00173-204ENST00000489452 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
LINC00173-204ENST00000489452 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
LINC00173-204ENST00000489452 COL15A1P39059 1388 aa17.97■□□□□ 0.47
LINC00173-204ENST00000489452 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
LINC00173-204ENST00000489452 ZNF496Q96IT1 587 aaPredicted RBP17.97■□□□□ 0.47
LINC00173-204ENST00000489452 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
LINC00173-204ENST00000489452 BCL2L12Q9HB09 334 aa17.97■□□□□ 0.47
LINC00173-204ENST00000489452 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
LINC00173-204ENST00000489452 SERPINB2P05120 415 aa17.96■□□□□ 0.47
LINC00173-204ENST00000489452 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
LINC00173-204ENST00000489452 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 RNF181Q9P0P0 153 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 MRC1P22897 1456 aa17.95■□□□□ 0.46
LINC00173-204ENST00000489452 KCNQ3O43525 872 aa17.94■□□□□ 0.46
LINC00173-204ENST00000489452 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
LINC00173-204ENST00000489452 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
LINC00173-204ENST00000489452 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
LINC00173-204ENST00000489452 A1BGP04217 495 aa17.93■□□□□ 0.46
LINC00173-204ENST00000489452 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
LINC00173-204ENST00000489452 A0A087WZG4 1122 aa17.92■□□□□ 0.46
LINC00173-204ENST00000489452 TOMM70O94826 608 aa17.92■□□□□ 0.46
LINC00173-204ENST00000489452 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
LINC00173-204ENST00000489452 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00173-204ENST00000489452 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
LINC00173-204ENST00000489452 FMNL2Q96PY5 1086 aa17.92■□□□□ 0.46
LINC00173-204ENST00000489452 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
LINC00173-204ENST00000489452 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
LINC00173-204ENST00000489452 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 RASSF7Q02833 373 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
LINC00173-204ENST00000489452 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
LINC00173-204ENST00000489452 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
LINC00173-204ENST00000489452 H0YIN7 160 aa17.9■□□□□ 0.46
LINC00173-204ENST00000489452 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
LINC00173-204ENST00000489452 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
LINC00173-204ENST00000489452 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
LINC00173-204ENST00000489452 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
LINC00173-204ENST00000489452 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
LINC00173-204ENST00000489452 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
LINC00173-204ENST00000489452 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
LINC00173-204ENST00000489452 MCM10Q7L590 875 aa17.88■□□□□ 0.45
LINC00173-204ENST00000489452 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
LINC00173-204ENST00000489452 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00173-204ENST00000489452 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
LINC00173-204ENST00000489452 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
LINC00173-204ENST00000489452 DCTN1Q14203 1278 aa17.87■□□□□ 0.45
LINC00173-204ENST00000489452 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
LINC00173-204ENST00000489452 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
LINC00173-204ENST00000489452 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
LINC00173-204ENST00000489452 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
LINC00173-204ENST00000489452 NPHP1O15259 732 aa17.86■□□□□ 0.45
LINC00173-204ENST00000489452 APLP1P51693 650 aa17.86■□□□□ 0.45
LINC00173-204ENST00000489452 AFDNP55196 1824 aaKnown RBP17.86■□□□□ 0.45
LINC00173-204ENST00000489452 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
LINC00173-204ENST00000489452 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
LINC00173-204ENST00000489452 LMNB1P20700 586 aa17.84■□□□□ 0.45
LINC00173-204ENST00000489452 PRELPP51888 382 aa17.84■□□□□ 0.45
LINC00173-204ENST00000489452 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
LINC00173-204ENST00000489452 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
LINC00173-204ENST00000489452 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
LINC00173-204ENST00000489452 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
LINC00173-204ENST00000489452 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
LINC00173-204ENST00000489452 C21orf2O43822 256 aa17.83■□□□□ 0.44
LINC00173-204ENST00000489452 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
LINC00173-204ENST00000489452 PDE6BP35913 854 aa17.83■□□□□ 0.44
LINC00173-204ENST00000489452 HTRA3P83110 453 aa17.83■□□□□ 0.44
LINC00173-204ENST00000489452 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
LINC00173-204ENST00000489452 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
LINC00173-204ENST00000489452 NFKBIEO00221 500 aa17.81■□□□□ 0.44
LINC00173-204ENST00000489452 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
LINC00173-204ENST00000489452 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
LINC00173-204ENST00000489452 SBF1O95248 1867 aa17.8■□□□□ 0.44
LINC00173-204ENST00000489452 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
LINC00173-204ENST00000489452 ST5P78524 1137 aa17.79■□□□□ 0.44
LINC00173-204ENST00000489452 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
LINC00173-204ENST00000489452 IFFO2Q5TF58 517 aa17.79■□□□□ 0.44
LINC00173-204ENST00000489452 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
LINC00173-204ENST00000489452 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
LINC00173-204ENST00000489452 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
LINC00173-204ENST00000489452 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
LINC00173-204ENST00000489452 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
LINC00173-204ENST00000489452 FSTL1Q12841 308 aa17.78■□□□□ 0.44
LINC00173-204ENST00000489452 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
LINC00173-204ENST00000489452 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
LINC00173-204ENST00000489452 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
LINC00173-204ENST00000489452 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
LINC00173-204ENST00000489452 NEFMP07197 916 aa17.77■□□□□ 0.44
LINC00173-204ENST00000489452 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
LINC00173-204ENST00000489452 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms