RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
ACTN4-206ENST00000489451 DPEP1P16444 411 aa15.99■□□□□ 0.15
ACTN4-206ENST00000489451 TGFB2P61812 414 aa15.99■□□□□ 0.15
ACTN4-206ENST00000489451 NMRK2Q9NPI5 230 aa15.99■□□□□ 0.15
ACTN4-206ENST00000489451 SIPA1L3O60292 1781 aaPredicted RBP15.99■□□□□ 0.15
ACTN4-206ENST00000489451 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
ACTN4-206ENST00000489451 NPC1L1Q9UHC9 1359 aa15.98■□□□□ 0.15
ACTN4-206ENST00000489451 PCNTO95613 3336 aa15.97■□□□□ 0.15
ACTN4-206ENST00000489451 SOS1Q07889 1333 aaPredicted RBP15.97■□□□□ 0.15
ACTN4-206ENST00000489451 NRXN2Q9P2S2 1712 aa15.97■□□□□ 0.15
ACTN4-206ENST00000489451 CCDC87Q9NVE4 849 aa15.97■□□□□ 0.15
ACTN4-206ENST00000489451 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
ACTN4-206ENST00000489451 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
ACTN4-206ENST00000489451 FSTL1Q12841 308 aa15.96■□□□□ 0.15
ACTN4-206ENST00000489451 BCS1LQ9Y276 419 aa15.96■□□□□ 0.15
ACTN4-206ENST00000489451 PARP3Q9Y6F1 533 aa15.96■□□□□ 0.15
ACTN4-206ENST00000489451 POLRMTO00411 1230 aaKnown RBP15.95■□□□□ 0.14
ACTN4-206ENST00000489451 TM4SF1P30408 202 aa15.95■□□□□ 0.14
ACTN4-206ENST00000489451 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
ACTN4-206ENST00000489451 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
ACTN4-206ENST00000489451 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
ACTN4-206ENST00000489451 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
ACTN4-206ENST00000489451 DLEC1Q9Y238 1755 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 COL15A1P39059 1388 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 FCHSD2O94868 740 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 CHRNA5P30532 468 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 SBF1O95248 1867 aa15.92■□□□□ 0.14
ACTN4-206ENST00000489451 CNGB1Q14028 1251 aaPredicted RBP15.91■□□□□ 0.14
ACTN4-206ENST00000489451 NFIXQ14938 502 aa15.91■□□□□ 0.14
ACTN4-206ENST00000489451 SCN7AQ01118 1682 aa15.91■□□□□ 0.14
ACTN4-206ENST00000489451 TNRC6CQ9HCJ0 1690 aaKnown RBP15.91■□□□□ 0.14
ACTN4-206ENST00000489451 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
ACTN4-206ENST00000489451 NARFQ9UHQ1 456 aa15.9■□□□□ 0.14
ACTN4-206ENST00000489451 CARMIL3Q8ND23 1372 aa15.89■□□□□ 0.13
ACTN4-206ENST00000489451 ANKRD31Q8N7Z5 1873 aa15.89■□□□□ 0.13
ACTN4-206ENST00000489451 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
ACTN4-206ENST00000489451 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
ACTN4-206ENST00000489451 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
ACTN4-206ENST00000489451 ZNF496Q96IT1 587 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-206ENST00000489451 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
ACTN4-206ENST00000489451 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
ACTN4-206ENST00000489451 ZPR1O75312 459 aa15.87■□□□□ 0.13
ACTN4-206ENST00000489451 EIF5P55010 431 aaKnown RBP15.87■□□□□ 0.13
ACTN4-206ENST00000489451 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
ACTN4-206ENST00000489451 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
ACTN4-206ENST00000489451 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
ACTN4-206ENST00000489451 KCNQ3O43525 872 aa15.86■□□□□ 0.13
ACTN4-206ENST00000489451 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
ACTN4-206ENST00000489451 C9orf131Q5VYM1 1079 aa15.86■□□□□ 0.13
ACTN4-206ENST00000489451 ZNF790Q6PG37 636 aa15.86■□□□□ 0.13
ACTN4-206ENST00000489451 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
ACTN4-206ENST00000489451 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
ACTN4-206ENST00000489451 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
ACTN4-206ENST00000489451 SMC1BQ8NDV3 1235 aa15.85■□□□□ 0.13
ACTN4-206ENST00000489451 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
ACTN4-206ENST00000489451 SERPINB2P05120 415 aa15.84■□□□□ 0.13
ACTN4-206ENST00000489451 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
ACTN4-206ENST00000489451 RASSF7Q02833 373 aa15.83■□□□□ 0.12
ACTN4-206ENST00000489451 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
ACTN4-206ENST00000489451 TEFQ10587 303 aa15.82■□□□□ 0.12
ACTN4-206ENST00000489451 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
ACTN4-206ENST00000489451 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
ACTN4-206ENST00000489451 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
ACTN4-206ENST00000489451 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
ACTN4-206ENST00000489451 STARD3NLO95772 234 aa15.81■□□□□ 0.12
ACTN4-206ENST00000489451 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
ACTN4-206ENST00000489451 TIAM2Q8IVF5 1701 aa15.81■□□□□ 0.12
ACTN4-206ENST00000489451 RNF181Q9P0P0 153 aa15.81■□□□□ 0.12
ACTN4-206ENST00000489451 A1BGP04217 495 aa15.8■□□□□ 0.12
ACTN4-206ENST00000489451 BICDL1Q6ZP65 573 aa15.8■□□□□ 0.12
ACTN4-206ENST00000489451 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
ACTN4-206ENST00000489451 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
ACTN4-206ENST00000489451 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
ACTN4-206ENST00000489451 CCDC24Q8N4L8 307 aa15.79■□□□□ 0.12
ACTN4-206ENST00000489451 RRAGCQ9HB90 399 aa15.79■□□□□ 0.12
ACTN4-206ENST00000489451 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
ACTN4-206ENST00000489451 PIP4K2AP48426 406 aaPredicted RBP15.78■□□□□ 0.12
ACTN4-206ENST00000489451 MLLT1Q03111 559 aaPredicted RBP15.78■□□□□ 0.12
ACTN4-206ENST00000489451 FMNL2Q96PY5 1086 aa15.78■□□□□ 0.12
ACTN4-206ENST00000489451 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
ACTN4-206ENST00000489451 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
ACTN4-206ENST00000489451 FER1L6Q2WGJ9 1857 aa15.78■□□□□ 0.12
ACTN4-206ENST00000489451 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 NFKBIEO00221 500 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 PRR5LQ6MZQ0 368 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 MCM10Q7L590 875 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 C2CD5Q86YS7 1000 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
ACTN4-206ENST00000489451 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
ACTN4-206ENST00000489451 A0A087WZG4 1122 aa15.76■□□□□ 0.11
ACTN4-206ENST00000489451 TTLL6Q8N841 843 aa15.76■□□□□ 0.11
ACTN4-206ENST00000489451 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
ACTN4-206ENST00000489451 TEX13AQ9BXU3 409 aaPredicted RBP15.76■□□□□ 0.11
ACTN4-206ENST00000489451 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
ACTN4-206ENST00000489451 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
ACTN4-206ENST00000489451 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
ACTN4-206ENST00000489451 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
ACTN4-206ENST00000489451 FOXN1O15353 648 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms