RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ABCC4O15439 1325 aa26.58■■□□□ 1.85
SND1-214ENST00000489417 RBM6P78332 1123 aaKnown RBP26.57■■□□□ 1.84
SND1-214ENST00000489417 MVPQ14764 893 aaKnown RBP26.57■■□□□ 1.84
SND1-214ENST00000489417 RGS12O14924 1447 aa26.57■■□□□ 1.84
SND1-214ENST00000489417 FLIIQ13045 1269 aa26.56■■□□□ 1.84
SND1-214ENST00000489417 USP16Q9Y5T5 823 aa26.56■■□□□ 1.84
SND1-214ENST00000489417 TMEM57Q8N5G2 664 aa26.56■■□□□ 1.84
SND1-214ENST00000489417 VSIG10Q8N0Z9 540 aa26.55■■□□□ 1.84
SND1-214ENST00000489417 DDX21Q9NR30 783 aaKnown RBP eCLIP26.55■■□□□ 1.84
SND1-214ENST00000489417 ITPRIPQ8IWB1 547 aa26.53■■□□□ 1.84
SND1-214ENST00000489417 RBM42Q9BTD8 480 aaKnown RBP26.53■■□□□ 1.84
SND1-214ENST00000489417 PHAXQ9H814 394 aaKnown RBP26.53■■□□□ 1.84
SND1-214ENST00000489417 KCNQ2O43526 872 aa26.52■■□□□ 1.84
SND1-214ENST00000489417 ANXA1P04083 346 aa26.52■■□□□ 1.84
SND1-214ENST00000489417 FKBP5Q13451 457 aaPredicted RBP26.52■■□□□ 1.84
SND1-214ENST00000489417 PROSER3Q2NL68 480 aa26.52■■□□□ 1.84
SND1-214ENST00000489417 HYPKQ9NX55 129 aa26.52■■□□□ 1.84
SND1-214ENST00000489417 NHSQ6T4R5 1651 aa26.51■■□□□ 1.84
SND1-214ENST00000489417 PDIA6Q15084 440 aa26.51■■□□□ 1.83
SND1-214ENST00000489417 ERBB4Q15303 1308 aa26.51■■□□□ 1.83
SND1-214ENST00000489417 FAM182BQ5T319 152 aa26.5■■□□□ 1.83
SND1-214ENST00000489417 TEX13AQ9BXU3 409 aaPredicted RBP26.5■■□□□ 1.83
SND1-214ENST00000489417 DDX19BQ9UMR2 479 aa26.5■■□□□ 1.83
SND1-214ENST00000489417 KAT6BQ8WYB5 2073 aa26.5■■□□□ 1.83
SND1-214ENST00000489417 AAMPQ13685 434 aa26.49■■□□□ 1.83
SND1-214ENST00000489417 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
SND1-214ENST00000489417 INTS3Q68E01 1043 aaKnown RBP26.48■■□□□ 1.83
SND1-214ENST00000489417 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
SND1-214ENST00000489417 KRT27Q7Z3Y8 459 aa26.48■■□□□ 1.83
SND1-214ENST00000489417 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
SND1-214ENST00000489417 CCDC136Q96JN2 1154 aa26.48■■□□□ 1.83
SND1-214ENST00000489417 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
SND1-214ENST00000489417 F6X3S4 739 aa26.47■■□□□ 1.83
SND1-214ENST00000489417 RXRBP28702 533 aa26.47■■□□□ 1.83
SND1-214ENST00000489417 PALLDQ8WX93 1383 aa26.47■■□□□ 1.83
SND1-214ENST00000489417 SLC4A9Q96Q91 983 aa26.47■■□□□ 1.83
SND1-214ENST00000489417 MYL6BP14649 208 aa26.46■■□□□ 1.83
SND1-214ENST00000489417 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
SND1-214ENST00000489417 TJP1Q07157 1748 aa26.45■■□□□ 1.83
SND1-214ENST00000489417 PXDNLA1KZ92 1463 aa26.45■■□□□ 1.82
SND1-214ENST00000489417 STARD3NLO95772 234 aa26.43■■□□□ 1.82
SND1-214ENST00000489417 A1BGP04217 495 aa26.43■■□□□ 1.82
SND1-214ENST00000489417 CCT4P50991 539 aaKnown RBP26.43■■□□□ 1.82
SND1-214ENST00000489417 SLC4A10Q6U841 1118 aa26.43■■□□□ 1.82
SND1-214ENST00000489417 LRP10Q7Z4F1 713 aa26.43■■□□□ 1.82
SND1-214ENST00000489417 CHMP4BQ9H444 224 aaKnown RBP26.43■■□□□ 1.82
SND1-214ENST00000489417 SBF2Q86WG5 1849 aa26.43■■□□□ 1.82
SND1-214ENST00000489417 CICQ96RK0 1608 aaPredicted RBP26.42■■□□□ 1.82
SND1-214ENST00000489417 BTAF1O14981 1849 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 NBPF26B4DH59 902 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 DDX58O95786 925 aaKnown RBP26.42■■□□□ 1.82
SND1-214ENST00000489417 PIP4K2AP48426 406 aaPredicted RBP26.42■■□□□ 1.82
SND1-214ENST00000489417 NBPF14Q5TI25 921 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 NBPF10Q6P3W6 841 aaKnown RBP26.42■■□□□ 1.82
SND1-214ENST00000489417 FAM196AQ6ZSG2 479 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 PTF1AQ7RTS3 328 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 NBPF15Q8N660 670 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 ADCY9O60503 1353 aa26.42■■□□□ 1.82
SND1-214ENST00000489417 LOC102724428A0A0B4J2F2 783 aa26.41■■□□□ 1.82
SND1-214ENST00000489417 SIK1P57059 783 aa26.41■■□□□ 1.82
SND1-214ENST00000489417 XAGE3Q8WTP9 111 aa26.41■■□□□ 1.82
SND1-214ENST00000489417 N4BP2Q86UW6 1770 aaPredicted RBP26.41■■□□□ 1.82
SND1-214ENST00000489417 PI4KAP2A4QPH2 592 aa26.4■■□□□ 1.82
SND1-214ENST00000489417 AIMP1Q12904 312 aaKnown RBP26.4■■□□□ 1.82
SND1-214ENST00000489417 KSR2Q6VAB6 950 aa26.4■■□□□ 1.82
SND1-214ENST00000489417 PI4KAP1Q8N8J0 262 aa26.4■■□□□ 1.82
SND1-214ENST00000489417 DNAAF4Q8WXU2 420 aa26.4■■□□□ 1.82
SND1-214ENST00000489417 ZBTB7BO15156 539 aaPredicted RBP26.39■■□□□ 1.82
SND1-214ENST00000489417 CYP19A1P11511 503 aaPredicted RBP26.39■■□□□ 1.82
SND1-214ENST00000489417 POTEAQ6S8J7 498 aa26.39■■□□□ 1.82
SND1-214ENST00000489417 COPS6Q7L5N1 327 aa26.39■■□□□ 1.82
SND1-214ENST00000489417 ZBTB40Q9NUA8 1239 aa26.39■■□□□ 1.82
SND1-214ENST00000489417 ATP6V1AP38606 617 aa26.39■■□□□ 1.81
SND1-214ENST00000489417 ZNF831Q5JPB2 1677 aa26.38■■□□□ 1.81
SND1-214ENST00000489417 BCL11BQ9C0K0 894 aaPredicted RBP26.37■■□□□ 1.81
SND1-214ENST00000489417 MAP3K2Q9Y2U5 619 aa26.37■■□□□ 1.81
SND1-214ENST00000489417 ATP10DQ9P241 1426 aa26.36■■□□□ 1.81
SND1-214ENST00000489417 ITPK1Q13572 414 aa26.35■■□□□ 1.81
SND1-214ENST00000489417 RIC3Q7Z5B4 369 aa26.35■■□□□ 1.81
SND1-214ENST00000489417 SRCIN1Q9C0H9 1055 aa26.34■■□□□ 1.81
SND1-214ENST00000489417 BEND3Q5T5X7 828 aa26.33■■□□□ 1.81
SND1-214ENST00000489417 ANKRD13DQ6ZTN6 518 aa26.33■■□□□ 1.81
SND1-214ENST00000489417 PCDHB15Q9Y5E8 787 aa26.33■■□□□ 1.81
SND1-214ENST00000489417 RREB1Q92766 1687 aa26.32■■□□□ 1.8
SND1-214ENST00000489417 PLBD2Q8NHP8 589 aa26.31■■□□□ 1.8
SND1-214ENST00000489417 ZBTB1Q9Y2K1 713 aa26.31■■□□□ 1.8
SND1-214ENST00000489417 TTLL7Q6ZT98 887 aa26.31■■□□□ 1.8
SND1-214ENST00000489417 MEIS3Q99687 375 aa26.31■■□□□ 1.8
SND1-214ENST00000489417 CCDC87Q9NVE4 849 aa26.31■■□□□ 1.8
SND1-214ENST00000489417 COL5A3P25940 1745 aaPredicted RBP26.3■■□□□ 1.8
SND1-214ENST00000489417 LY75O60449 1722 aa26.29■■□□□ 1.8
SND1-214ENST00000489417 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
SND1-214ENST00000489417 CRKLP46109 303 aaKnown RBP26.29■■□□□ 1.8
SND1-214ENST00000489417 INTS5Q6P9B9 1019 aaKnown RBP26.29■■□□□ 1.8
SND1-214ENST00000489417 METTL22Q9BUU2 404 aaPredicted RBP26.29■■□□□ 1.8
SND1-214ENST00000489417 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
SND1-214ENST00000489417 TRIM37O94972 964 aa26.28■■□□□ 1.8
SND1-214ENST00000489417 IL6STP40189 918 aaPredicted RBP26.28■■□□□ 1.8
SND1-214ENST00000489417 LINS1Q8NG48 757 aa26.28■■□□□ 1.8
SND1-214ENST00000489417 C1orf115Q9H7X2 142 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms