RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.04
PTP4A2-206ENST00000489313 RBM46Q8TBY0 533 aaKnown RBP14.77□□□□□ -0.04
PTP4A2-206ENST00000489313 AFDNP55196 1824 aaKnown RBP14.77□□□□□ -0.05
PTP4A2-206ENST00000489313 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.05
PTP4A2-206ENST00000489313 EIF4G2P78344 907 aaKnown RBP eCLIP14.77□□□□□ -0.05
PTP4A2-206ENST00000489313 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.05
PTP4A2-206ENST00000489313 IL13P35225 146 aa14.76□□□□□ -0.05
PTP4A2-206ENST00000489313 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
PTP4A2-206ENST00000489313 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
PTP4A2-206ENST00000489313 ZPR1O75312 459 aa14.75□□□□□ -0.05
PTP4A2-206ENST00000489313 TM4SF1P30408 202 aa14.75□□□□□ -0.05
PTP4A2-206ENST00000489313 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
PTP4A2-206ENST00000489313 KDM2BQ8NHM5 1336 aa14.75□□□□□ -0.05
PTP4A2-206ENST00000489313 RRAGCQ9HB90 399 aa14.74□□□□□ -0.05
PTP4A2-206ENST00000489313 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
PTP4A2-206ENST00000489313 SOS1Q07889 1333 aaPredicted RBP14.74□□□□□ -0.05
PTP4A2-206ENST00000489313 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 RASSF7Q02833 373 aa14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 FSTL1Q12841 308 aa14.73□□□□□ -0.05
PTP4A2-206ENST00000489313 NFIXQ14938 502 aa14.72□□□□□ -0.05
PTP4A2-206ENST00000489313 KLRG1Q96E93 195 aa14.72□□□□□ -0.05
PTP4A2-206ENST00000489313 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
PTP4A2-206ENST00000489313 CLSPNQ9HAW4 1339 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 CCDC88AQ3V6T2 1871 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 NRXN2Q9P2S2 1712 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 HMOX1P09601 288 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 MRC1P22897 1456 aa14.71□□□□□ -0.05
PTP4A2-206ENST00000489313 DLEC1Q9Y238 1755 aa14.71□□□□□ -0.06
PTP4A2-206ENST00000489313 COL15A1P39059 1388 aa14.71□□□□□ -0.06
PTP4A2-206ENST00000489313 RNMTO43148 476 aaKnown RBP14.7□□□□□ -0.06
PTP4A2-206ENST00000489313 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
PTP4A2-206ENST00000489313 PRELPP51888 382 aa14.69□□□□□ -0.06
PTP4A2-206ENST00000489313 BCL2L12Q9HB09 334 aa14.69□□□□□ -0.06
PTP4A2-206ENST00000489313 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 UBR2Q8IWV8 1755 aa14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 SERPINB2P05120 415 aa14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 MTHFSDQ2M296 383 aaKnown RBP14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 JMYQ8N9B5 988 aa14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 CARMIL3Q8ND23 1372 aa14.68□□□□□ -0.06
PTP4A2-206ENST00000489313 LMNB1P20700 586 aa14.67□□□□□ -0.06
PTP4A2-206ENST00000489313 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
PTP4A2-206ENST00000489313 COL13A1Q5TAT6 717 aaPredicted RBP14.67□□□□□ -0.06
PTP4A2-206ENST00000489313 TTLL6Q8N841 843 aa14.67□□□□□ -0.06
PTP4A2-206ENST00000489313 SMC1BQ8NDV3 1235 aa14.67□□□□□ -0.06
PTP4A2-206ENST00000489313 BICDL1Q6ZP65 573 aa14.66□□□□□ -0.06
PTP4A2-206ENST00000489313 C2CD5Q86YS7 1000 aa14.66□□□□□ -0.06
PTP4A2-206ENST00000489313 ZC3H4Q9UPT8 1303 aaKnown RBP14.66□□□□□ -0.06
PTP4A2-206ENST00000489313 ANKRD31Q8N7Z5 1873 aa14.65□□□□□ -0.06
PTP4A2-206ENST00000489313 GLTPD2A6NH11 291 aa14.64□□□□□ -0.07
PTP4A2-206ENST00000489313 H0YIN7 160 aa14.64□□□□□ -0.07
PTP4A2-206ENST00000489313 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
PTP4A2-206ENST00000489313 NFKBIEO00221 500 aa14.64□□□□□ -0.07
PTP4A2-206ENST00000489313 VEGFAP15692 232 aaPredicted RBP14.64□□□□□ -0.07
PTP4A2-206ENST00000489313 COL11A2P13942 1736 aaPredicted RBP14.63□□□□□ -0.07
PTP4A2-206ENST00000489313 DIAPH1O60610 1272 aaKnown RBP14.63□□□□□ -0.07
PTP4A2-206ENST00000489313 EIF5P55010 431 aaKnown RBP14.63□□□□□ -0.07
PTP4A2-206ENST00000489313 CCDC24Q8N4L8 307 aa14.63□□□□□ -0.07
PTP4A2-206ENST00000489313 STARD3NLO95772 234 aa14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 TBC1D9BQ66K14 1250 aa14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 SCN7AQ01118 1682 aa14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 DICER1Q9UPY3 1922 aaKnown RBP14.62□□□□□ -0.07
PTP4A2-206ENST00000489313 KIF7Q2M1P5 1343 aa14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 ZNF622Q969S3 477 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 ZNF330Q9Y3S2 320 aaPredicted RBP14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 SIPA1L3O60292 1781 aaPredicted RBP14.61□□□□□ -0.07
PTP4A2-206ENST00000489313 FER1L6Q2WGJ9 1857 aa14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 TBC1D2BQ9UPU7 963 aa14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 A0A087WZG4 1122 aa14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 POTECB2RU33 542 aa14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 C21orf2O43822 256 aa14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 CNGB1Q14028 1251 aaPredicted RBP14.6□□□□□ -0.07
PTP4A2-206ENST00000489313 HEG1Q9ULI3 1381 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 TEFQ10587 303 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 PRR5LQ6MZQ0 368 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 TNS4Q8IZW8 715 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 IL17REQ8NFR9 667 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 BRIP1Q9BX63 1249 aa14.59□□□□□ -0.07
PTP4A2-206ENST00000489313 COL3A1P02461 1466 aaPredicted RBP14.58□□□□□ -0.07
PTP4A2-206ENST00000489313 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
PTP4A2-206ENST00000489313 PER1O15534 1290 aaPredicted RBP14.58□□□□□ -0.08
PTP4A2-206ENST00000489313 PDE6BP35913 854 aa14.58□□□□□ -0.08
PTP4A2-206ENST00000489313 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.08
PTP4A2-206ENST00000489313 SLX4Q8IY92 1834 aa14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 HSPA1AP0DMV8 641 aaKnown RBP14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 HSPA1BP0DMV9 641 aaKnown RBP14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 ERFEQ4G0M1 354 aa14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
PTP4A2-206ENST00000489313 A1BGP04217 495 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms