RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 HMOX1P09601 288 aa25.83■■□□□ 1.73
GGPS1-206ENST00000488594 FSTL1Q12841 308 aa25.83■■□□□ 1.73
GGPS1-206ENST00000488594 SLC39A6Q13433 755 aa25.83■■□□□ 1.73
GGPS1-206ENST00000488594 NFIXQ14938 502 aa25.82■■□□□ 1.72
GGPS1-206ENST00000488594 COL15A1P39059 1388 aa25.82■■□□□ 1.72
GGPS1-206ENST00000488594 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
GGPS1-206ENST00000488594 KCPQ6ZWJ8 1503 aa25.81■■□□□ 1.72
GGPS1-206ENST00000488594 DIAPH1O60610 1272 aaKnown RBP25.81■■□□□ 1.72
GGPS1-206ENST00000488594 MTHFSDQ2M296 383 aaKnown RBP25.81■■□□□ 1.72
GGPS1-206ENST00000488594 ZBTB1Q9Y2K1 713 aa25.81■■□□□ 1.72
GGPS1-206ENST00000488594 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
GGPS1-206ENST00000488594 KIF7Q2M1P5 1343 aa25.79■■□□□ 1.72
GGPS1-206ENST00000488594 STARD3NLO95772 234 aa25.77■■□□□ 1.72
GGPS1-206ENST00000488594 SERPINB2P05120 415 aa25.77■■□□□ 1.72
GGPS1-206ENST00000488594 BCL2L12Q9HB09 334 aa25.77■■□□□ 1.72
GGPS1-206ENST00000488594 TTC5Q8N0Z6 440 aa25.76■■□□□ 1.71
GGPS1-206ENST00000488594 RRAGCQ9HB90 399 aa25.76■■□□□ 1.71
GGPS1-206ENST00000488594 PER1O15534 1290 aaPredicted RBP25.75■■□□□ 1.71
GGPS1-206ENST00000488594 NRXN2Q9P2S2 1712 aa25.74■■□□□ 1.71
GGPS1-206ENST00000488594 A0A087WZG4 1122 aa25.74■■□□□ 1.71
GGPS1-206ENST00000488594 LMNB1P20700 586 aa25.74■■□□□ 1.71
GGPS1-206ENST00000488594 CANXP27824 592 aaKnown RBP25.74■■□□□ 1.71
GGPS1-206ENST00000488594 TTLL6Q8N841 843 aa25.74■■□□□ 1.71
GGPS1-206ENST00000488594 WDR90Q96KV7 1748 aa25.73■■□□□ 1.71
GGPS1-206ENST00000488594 TNRC6CQ9HCJ0 1690 aaKnown RBP25.73■■□□□ 1.71
GGPS1-206ENST00000488594 H0YIN7 160 aa25.72■■□□□ 1.71
GGPS1-206ENST00000488594 EIF5P55010 431 aaKnown RBP25.72■■□□□ 1.71
GGPS1-206ENST00000488594 RASSF7Q02833 373 aa25.72■■□□□ 1.71
GGPS1-206ENST00000488594 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
GGPS1-206ENST00000488594 SMC1BQ8NDV3 1235 aa25.72■■□□□ 1.71
GGPS1-206ENST00000488594 KLRG1Q96E93 195 aa25.72■■□□□ 1.71
GGPS1-206ENST00000488594 C2CD5Q86YS7 1000 aa25.71■■□□□ 1.71
GGPS1-206ENST00000488594 GAS2L2Q8NHY3 880 aa25.7■■□□□ 1.71
GGPS1-206ENST00000488594 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.71
GGPS1-206ENST00000488594 SBF1O95248 1867 aa25.7■■□□□ 1.7
GGPS1-206ENST00000488594 AFDNP55196 1824 aaKnown RBP25.7■■□□□ 1.7
GGPS1-206ENST00000488594 UBR2Q8IWV8 1755 aa25.7■■□□□ 1.7
GGPS1-206ENST00000488594 TEFQ10587 303 aa25.69■■□□□ 1.7
GGPS1-206ENST00000488594 PDZRN3Q9UPQ7 1066 aa25.69■■□□□ 1.7
GGPS1-206ENST00000488594 GLTPD2A6NH11 291 aa25.69■■□□□ 1.7
GGPS1-206ENST00000488594 JMYQ8N9B5 988 aa25.69■■□□□ 1.7
GGPS1-206ENST00000488594 NPC1L1Q9UHC9 1359 aa25.68■■□□□ 1.7
GGPS1-206ENST00000488594 DLEC1Q9Y238 1755 aa25.68■■□□□ 1.7
GGPS1-206ENST00000488594 GNAT3A8MTJ3 354 aa25.68■■□□□ 1.7
GGPS1-206ENST00000488594 VEGFAP15692 232 aaPredicted RBP25.68■■□□□ 1.7
GGPS1-206ENST00000488594 ZNF790Q6PG37 636 aa25.68■■□□□ 1.7
GGPS1-206ENST00000488594 ZNF496Q96IT1 587 aaPredicted RBP25.68■■□□□ 1.7
GGPS1-206ENST00000488594 HEG1Q9ULI3 1381 aa25.67■■□□□ 1.7
GGPS1-206ENST00000488594 VIRMAQ69YN4 1812 aaKnown RBP25.67■■□□□ 1.7
GGPS1-206ENST00000488594 HTRA3P83110 453 aa25.67■■□□□ 1.7
GGPS1-206ENST00000488594 BICDL1Q6ZP65 573 aa25.67■■□□□ 1.7
GGPS1-206ENST00000488594 CARMIL3Q8ND23 1372 aa25.67■■□□□ 1.7
GGPS1-206ENST00000488594 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
GGPS1-206ENST00000488594 IL17REQ8NFR9 667 aa25.66■■□□□ 1.7
GGPS1-206ENST00000488594 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
GGPS1-206ENST00000488594 PDE6BP35913 854 aa25.65■■□□□ 1.7
GGPS1-206ENST00000488594 BRIP1Q9BX63 1249 aa25.65■■□□□ 1.7
GGPS1-206ENST00000488594 IL6STP40189 918 aaPredicted RBP25.64■■□□□ 1.69
GGPS1-206ENST00000488594 PRELPP51888 382 aa25.64■■□□□ 1.69
GGPS1-206ENST00000488594 TBC1D9BQ66K14 1250 aa25.64■■□□□ 1.69
GGPS1-206ENST00000488594 NFKBIEO00221 500 aa25.63■■□□□ 1.69
GGPS1-206ENST00000488594 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
GGPS1-206ENST00000488594 FMNL2Q96PY5 1086 aa25.63■■□□□ 1.69
GGPS1-206ENST00000488594 ZNF330Q9Y3S2 320 aaPredicted RBP25.62■■□□□ 1.69
GGPS1-206ENST00000488594 ZNF622Q969S3 477 aaKnown RBP eCLIP25.61■■□□□ 1.69
GGPS1-206ENST00000488594 PRR5LQ6MZQ0 368 aa25.6■■□□□ 1.69
GGPS1-206ENST00000488594 DPY19L2Q6NUT2 758 aa25.6■■□□□ 1.69
GGPS1-206ENST00000488594 TBC1D2BQ9UPU7 963 aa25.6■■□□□ 1.69
GGPS1-206ENST00000488594 CEMIPQ8WUJ3 1361 aa25.6■■□□□ 1.69
GGPS1-206ENST00000488594 SCN7AQ01118 1682 aa25.59■■□□□ 1.69
GGPS1-206ENST00000488594 SETDB2Q96T68 719 aa25.59■■□□□ 1.69
GGPS1-206ENST00000488594 CNBD1Q8NA66 436 aa25.57■■□□□ 1.68
GGPS1-206ENST00000488594 NPHP1O15259 732 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 C21orf2O43822 256 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 TIAM2Q8IVF5 1701 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 BTBD11A6QL63 1104 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 CAMTA2O94983 1202 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 A1BGP04217 495 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 ERFEQ4G0M1 354 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 CNKSR1Q969H4 720 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 CFAP53Q96M91 514 aa25.56■■□□□ 1.68
GGPS1-206ENST00000488594 LTBP3Q9NS15 1303 aa25.55■■□□□ 1.68
GGPS1-206ENST00000488594 SIPA1L3O60292 1781 aaPredicted RBP25.55■■□□□ 1.68
GGPS1-206ENST00000488594 ST5P78524 1137 aa25.55■■□□□ 1.68
GGPS1-206ENST00000488594 CNGB1Q14028 1251 aaPredicted RBP25.54■■□□□ 1.68
GGPS1-206ENST00000488594 SOGA3Q5TF21 947 aa25.54■■□□□ 1.68
GGPS1-206ENST00000488594 STYK1Q6J9G0 422 aa25.54■■□□□ 1.68
GGPS1-206ENST00000488594 ANKRD31Q8N7Z5 1873 aa25.54■■□□□ 1.68
GGPS1-206ENST00000488594 TAOK3Q9H2K8 898 aa25.54■■□□□ 1.68
GGPS1-206ENST00000488594 PRKAR2BP31323 418 aa25.53■■□□□ 1.68
GGPS1-206ENST00000488594 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
GGPS1-206ENST00000488594 CCDC24Q8N4L8 307 aa25.53■■□□□ 1.68
GGPS1-206ENST00000488594 POTECB2RU33 542 aa25.52■■□□□ 1.68
GGPS1-206ENST00000488594 PHACTR3Q96KR7 559 aa25.52■■□□□ 1.68
GGPS1-206ENST00000488594 RSPH6AQ9H0K4 717 aa25.52■■□□□ 1.68
GGPS1-206ENST00000488594 ZNF219Q9P2Y4 722 aaPredicted RBP25.52■■□□□ 1.68
GGPS1-206ENST00000488594 SRGNP10124 158 aa25.51■■□□□ 1.67
GGPS1-206ENST00000488594 COL13A1Q5TAT6 717 aaPredicted RBP25.51■■□□□ 1.67
GGPS1-206ENST00000488594 MASTLQ96GX5 879 aa25.51■■□□□ 1.67
GGPS1-206ENST00000488594 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms