RNA–Protein interactions for RNA: ENST00000488497.7

U2SURP-211, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 1 (best)

Gene U2SURP, Length 3,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-211ENST00000488497 ZNF652Q9Y2D9 606 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 MAP2P11137 1827 aaKnown RBP8.68□□□□□ -1.02
U2SURP-211ENST00000488497 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
U2SURP-211ENST00000488497 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
U2SURP-211ENST00000488497 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
U2SURP-211ENST00000488497 TEFQ10587 303 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 ZNF622Q969S3 477 aaKnown RBP eCLIP8.68□□□□□ -1.023e-8■■■□□ 14.9
U2SURP-211ENST00000488497 SRP68Q9UHB9 627 aaKnown RBP8.68□□□□□ -1.02
U2SURP-211ENST00000488497 KCNA3P22001 575 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 CHRNA5P30532 468 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 CHADLQ6NUI6 762 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 CREBZFQ9NS37 354 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 ARFGEF1Q9Y6D6 1849 aa8.68□□□□□ -1.02
U2SURP-211ENST00000488497 COL15A1P39059 1388 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 BRIP1Q9BX63 1249 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 DDR1Q08345 913 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 TMX4Q9H1E5 349 aaPredicted RBP8.67□□□□□ -1.02
U2SURP-211ENST00000488497 TAOK3Q9H2K8 898 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 PANK3Q9H999 370 aa8.67□□□□□ -1.02
U2SURP-211ENST00000488497 TRIM26Q12899 539 aaPredicted RBP8.66□□□□□ -1.02
U2SURP-211ENST00000488497 NFIXQ14938 502 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 BEGAINQ9BUH8 593 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
U2SURP-211ENST00000488497 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 RNMTO43148 476 aaKnown RBP8.66□□□□□ -1.02
U2SURP-211ENST00000488497 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 INTS5Q6P9B9 1019 aaKnown RBP8.66□□□□□ -1.02
U2SURP-211ENST00000488497 PRDM10Q9NQV6 1147 aa8.66□□□□□ -1.02
U2SURP-211ENST00000488497 CARMIL3Q8ND23 1372 aa8.65□□□□□ -1.02
U2SURP-211ENST00000488497 N4BP2Q86UW6 1770 aaPredicted RBP8.65□□□□□ -1.02
U2SURP-211ENST00000488497 NEFMP07197 916 aa8.65□□□□□ -1.02
U2SURP-211ENST00000488497 CYP19A1P11511 503 aaPredicted RBP8.65□□□□□ -1.02
U2SURP-211ENST00000488497 COL13A1Q5TAT6 717 aaPredicted RBP8.65□□□□□ -1.02
U2SURP-211ENST00000488497 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
U2SURP-211ENST00000488497 CNBD1Q8NA66 436 aa8.65□□□□□ -1.02
U2SURP-211ENST00000488497 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
U2SURP-211ENST00000488497 LDHDQ86WU2 507 aa8.65□□□□□ -1.02
U2SURP-211ENST00000488497 DIAPH1O60610 1272 aaKnown RBP8.65□□□□□ -1.03
U2SURP-211ENST00000488497 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.03
U2SURP-211ENST00000488497 RASSF7Q02833 373 aa8.65□□□□□ -1.03
U2SURP-211ENST00000488497 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.03
U2SURP-211ENST00000488497 CFAP53Q96M91 514 aa8.65□□□□□ -1.03
U2SURP-211ENST00000488497 FMNL2Q96PY5 1086 aa8.64□□□□□ -1.03
U2SURP-211ENST00000488497 RGL2O15211 777 aa8.64□□□□□ -1.03
U2SURP-211ENST00000488497 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
U2SURP-211ENST00000488497 CCDC93Q567U6 631 aa8.64□□□□□ -1.03
U2SURP-211ENST00000488497 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
U2SURP-211ENST00000488497 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
U2SURP-211ENST00000488497 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
U2SURP-211ENST00000488497 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
U2SURP-211ENST00000488497 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 NUDCQ9Y266 331 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 MAP2K1Q02750 393 aaPredicted RBP8.63□□□□□ -1.03
U2SURP-211ENST00000488497 CLEC11AQ9Y240 323 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
U2SURP-211ENST00000488497 LMOD1P29536 600 aaPredicted RBP8.62□□□□□ -1.03
U2SURP-211ENST00000488497 ALDH1B1P30837 517 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 IL13P35225 146 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 ECE1P42892 770 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 RTF1Q92541 710 aaKnown RBP8.62□□□□□ -1.03
U2SURP-211ENST00000488497 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 GNAT3A8MTJ3 354 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 HACL1Q9UJ83 578 aa8.62□□□□□ -1.03
U2SURP-211ENST00000488497 C21orf2O43822 256 aa8.61□□□□□ -1.03
U2SURP-211ENST00000488497 NPR1P16066 1061 aa8.61□□□□□ -1.03
U2SURP-211ENST00000488497 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
U2SURP-211ENST00000488497 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
U2SURP-211ENST00000488497 HTRA3P83110 453 aa8.61□□□□□ -1.03
U2SURP-211ENST00000488497 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
U2SURP-211ENST00000488497 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
U2SURP-211ENST00000488497 NYXQ9GZU5 481 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 BRCA1P38398 1863 aaKnown RBP8.6□□□□□ -1.03
U2SURP-211ENST00000488497 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 L3MBTL3Q96JM7 780 aaPredicted RBP8.6□□□□□ -1.03
U2SURP-211ENST00000488497 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
U2SURP-211ENST00000488497 NFKBIEO00221 500 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 ZNF219Q9P2Y4 722 aaPredicted RBP8.6□□□□□ -1.03
U2SURP-211ENST00000488497 CNTNAP1P78357 1384 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 HEG1Q9ULI3 1381 aa8.6□□□□□ -1.03
U2SURP-211ENST00000488497 MRC1P22897 1456 aa8.59□□□□□ -1.03
U2SURP-211ENST00000488497 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 HSPA5P11021 654 aaKnown RBP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 PRR5LQ6MZQ0 368 aa8.59□□□□□ -1.03
U2SURP-211ENST00000488497 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.03
U2SURP-211ENST00000488497 CA12O43570 354 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms