RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 KIAA1551Q9HCM1 1747 aa24.23■■□□□ 1.47
MMP11-210ENST00000488363 N4BP2Q86UW6 1770 aaPredicted RBP24.22■■□□□ 1.47
MMP11-210ENST00000488363 DPEP1P16444 411 aa24.22■■□□□ 1.47
MMP11-210ENST00000488363 NARFQ9UHQ1 456 aa24.22■■□□□ 1.47
MMP11-210ENST00000488363 SIPA1L3O60292 1781 aaPredicted RBP24.21■■□□□ 1.47
MMP11-210ENST00000488363 HEG1Q9ULI3 1381 aa24.21■■□□□ 1.47
MMP11-210ENST00000488363 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
MMP11-210ENST00000488363 TM4SF1P30408 202 aa24.2■■□□□ 1.46
MMP11-210ENST00000488363 TEX13AQ9BXU3 409 aaPredicted RBP24.2■■□□□ 1.46
MMP11-210ENST00000488363 BCS1LQ9Y276 419 aa24.2■■□□□ 1.46
MMP11-210ENST00000488363 ATP10DQ9P241 1426 aa24.19■■□□□ 1.46
MMP11-210ENST00000488363 BTBD11A6QL63 1104 aa24.19■■□□□ 1.46
MMP11-210ENST00000488363 POLRMTO00411 1230 aaKnown RBP24.19■■□□□ 1.46
MMP11-210ENST00000488363 GIGYF1O75420 1035 aaPredicted RBP24.19■■□□□ 1.46
MMP11-210ENST00000488363 RTF1Q92541 710 aaKnown RBP24.19■■□□□ 1.46
MMP11-210ENST00000488363 FMNL2Q96PY5 1086 aa24.19■■□□□ 1.46
MMP11-210ENST00000488363 C1QTNF8P60827 252 aa24.17■■□□□ 1.46
MMP11-210ENST00000488363 ADCY9O60503 1353 aa24.16■■□□□ 1.46
MMP11-210ENST00000488363 KCNQ3O43525 872 aa24.16■■□□□ 1.46
MMP11-210ENST00000488363 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
MMP11-210ENST00000488363 MCM10Q7L590 875 aa24.16■■□□□ 1.46
MMP11-210ENST00000488363 A0A087WZG4 1122 aa24.15■■□□□ 1.46
MMP11-210ENST00000488363 KCNA3P22001 575 aa24.15■■□□□ 1.46
MMP11-210ENST00000488363 NFIXQ14938 502 aa24.15■■□□□ 1.46
MMP11-210ENST00000488363 BCL2L12Q9HB09 334 aa24.15■■□□□ 1.46
MMP11-210ENST00000488363 PIM2Q9P1W9 311 aa24.14■■□□□ 1.45
MMP11-210ENST00000488363 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
MMP11-210ENST00000488363 NEFMP07197 916 aa24.12■■□□□ 1.45
MMP11-210ENST00000488363 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
MMP11-210ENST00000488363 ARHGAP27Q6ZUM4 889 aa24.12■■□□□ 1.45
MMP11-210ENST00000488363 GPBP1L1Q9HC44 474 aaPredicted RBP24.12■■□□□ 1.45
MMP11-210ENST00000488363 ZNF330Q9Y3S2 320 aaPredicted RBP24.12■■□□□ 1.45
MMP11-210ENST00000488363 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
MMP11-210ENST00000488363 A1BGP04217 495 aa24.11■■□□□ 1.45
MMP11-210ENST00000488363 CHRNA5P30532 468 aa24.11■■□□□ 1.45
MMP11-210ENST00000488363 IL6STP40189 918 aaPredicted RBP24.11■■□□□ 1.45
MMP11-210ENST00000488363 SERPINB2P05120 415 aa24.1■■□□□ 1.45
MMP11-210ENST00000488363 DALRD3Q5D0E6 543 aaKnown RBP24.1■■□□□ 1.45
MMP11-210ENST00000488363 ZNF526Q8TF50 670 aaPredicted RBP24.1■■□□□ 1.45
MMP11-210ENST00000488363 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
MMP11-210ENST00000488363 AFDNP55196 1824 aaKnown RBP24.08■■□□□ 1.45
MMP11-210ENST00000488363 BICDL1Q6ZP65 573 aa24.08■■□□□ 1.45
MMP11-210ENST00000488363 TBC1D2BQ9UPU7 963 aa24.08■■□□□ 1.45
MMP11-210ENST00000488363 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
MMP11-210ENST00000488363 NRXN2Q9P2S2 1712 aa24.07■■□□□ 1.44
MMP11-210ENST00000488363 SNRPA1P09661 255 aaKnown RBP24.07■■□□□ 1.44
MMP11-210ENST00000488363 SENP3-EIF4A1A0A087X0R7 540 aa24.06■■□□□ 1.44
MMP11-210ENST00000488363 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
MMP11-210ENST00000488363 TBC1D9BQ66K14 1250 aa24.06■■□□□ 1.44
MMP11-210ENST00000488363 PLEKHF1Q96S99 279 aa24.06■■□□□ 1.44
MMP11-210ENST00000488363 ARFGEF1Q9Y6D6 1849 aa24.05■■□□□ 1.44
MMP11-210ENST00000488363 PRAMEF22A3QJZ6 481 aa24.05■■□□□ 1.44
MMP11-210ENST00000488363 RALBP1Q15311 655 aa24.05■■□□□ 1.44
MMP11-210ENST00000488363 PNNQ9H307 717 aaKnown RBP24.05■■□□□ 1.44
MMP11-210ENST00000488363 SCN7AQ01118 1682 aa24.05■■□□□ 1.44
MMP11-210ENST00000488363 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
MMP11-210ENST00000488363 PIP4K2AP48426 406 aaPredicted RBP24.03■■□□□ 1.44
MMP11-210ENST00000488363 DDX10Q13206 875 aaKnown RBP24.03■■□□□ 1.44
MMP11-210ENST00000488363 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
MMP11-210ENST00000488363 DZIP3Q86Y13 1208 aaKnown RBP24.02■■□□□ 1.44
MMP11-210ENST00000488363 MIS18AQ9NYP9 233 aa24.02■■□□□ 1.44
MMP11-210ENST00000488363 MAPK8IP3Q9UPT6 1336 aa24.02■■□□□ 1.44
MMP11-210ENST00000488363 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
MMP11-210ENST00000488363 C9orf131Q5VYM1 1079 aa24■■□□□ 1.43
MMP11-210ENST00000488363 C2CD5Q86YS7 1000 aa24■■□□□ 1.43
MMP11-210ENST00000488363 PNISRQ8TF01 805 aaKnown RBP24■■□□□ 1.43
MMP11-210ENST00000488363 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
MMP11-210ENST00000488363 H0YIN7 160 aa23.99■■□□□ 1.43
MMP11-210ENST00000488363 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
MMP11-210ENST00000488363 PRR5LQ6MZQ0 368 aa23.98■■□□□ 1.43
MMP11-210ENST00000488363 TTLL6Q8N841 843 aa23.97■■□□□ 1.43
MMP11-210ENST00000488363 THUMPD2Q9BTF0 503 aaKnown RBP23.97■■□□□ 1.43
MMP11-210ENST00000488363 NBPF26B4DH59 902 aa23.96■■□□□ 1.43
MMP11-210ENST00000488363 NBPF10Q6P3W6 841 aaKnown RBP23.96■■□□□ 1.43
MMP11-210ENST00000488363 NBPF15Q8N660 670 aa23.96■■□□□ 1.43
MMP11-210ENST00000488363 BRIP1Q9BX63 1249 aa23.96■■□□□ 1.43
MMP11-210ENST00000488363 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
MMP11-210ENST00000488363 DLEC1Q9Y238 1755 aa23.96■■□□□ 1.43
MMP11-210ENST00000488363 MYBBP1AQ9BQG0 1328 aaKnown RBP23.95■■□□□ 1.42
MMP11-210ENST00000488363 KIF3CO14782 793 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 NPHP1O15259 732 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 PDE6BP35913 854 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 CLEC4GQ6UXB4 293 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 CCDC24Q8N4L8 307 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 CNBD1Q8NA66 436 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 PDZRN3Q9UPQ7 1066 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 ZNF652Q9Y2D9 606 aa23.95■■□□□ 1.42
MMP11-210ENST00000488363 KDM3BQ7LBC6 1761 aa23.93■■□□□ 1.42
MMP11-210ENST00000488363 EIF4A1P60842 406 aaKnown RBP23.93■■□□□ 1.42
MMP11-210ENST00000488363 ANKRD31Q8N7Z5 1873 aa23.92■■□□□ 1.42
MMP11-210ENST00000488363 ST5P78524 1137 aa23.92■■□□□ 1.42
MMP11-210ENST00000488363 ZNF622Q969S3 477 aaKnown RBP eCLIP23.92■■□□□ 1.42
MMP11-210ENST00000488363 RIPK4P57078 832 aa23.91■■□□□ 1.42
MMP11-210ENST00000488363 RASSF7Q02833 373 aa23.91■■□□□ 1.42
MMP11-210ENST00000488363 LAMB4A4D0S4 1761 aa23.91■■□□□ 1.42
MMP11-210ENST00000488363 RGL2O15211 777 aa23.9■■□□□ 1.42
MMP11-210ENST00000488363 NBPF5PQ86XG9 351 aaPredicted RBP23.9■■□□□ 1.42
MMP11-210ENST00000488363 NMRK2Q9NPI5 230 aa23.88■■□□□ 1.41
MMP11-210ENST00000488363 TSPYL4Q9UJ04 414 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms