RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 USPL1Q5W0Q7 1092 aa25.84■■□□□ 1.73
CD55-209ENST00000488171 HEG1Q9ULI3 1381 aa25.84■■□□□ 1.73
CD55-209ENST00000488171 ZPR1O75312 459 aa25.83■■□□□ 1.73
CD55-209ENST00000488171 TM4SF1P30408 202 aa25.82■■□□□ 1.72
CD55-209ENST00000488171 DPEP1P16444 411 aa25.82■■□□□ 1.72
CD55-209ENST00000488171 NARFQ9UHQ1 456 aa25.82■■□□□ 1.72
CD55-209ENST00000488171 BRCA1P38398 1863 aaKnown RBP25.81■■□□□ 1.72
CD55-209ENST00000488171 POLRMTO00411 1230 aaKnown RBP25.81■■□□□ 1.72
CD55-209ENST00000488171 STARD3NLO95772 234 aa25.81■■□□□ 1.72
CD55-209ENST00000488171 KCNQ3O43525 872 aa25.8■■□□□ 1.72
CD55-209ENST00000488171 CANXP27824 592 aaKnown RBP25.8■■□□□ 1.72
CD55-209ENST00000488171 ADCY9O60503 1353 aa25.8■■□□□ 1.72
CD55-209ENST00000488171 KCNA3P22001 575 aa25.79■■□□□ 1.72
CD55-209ENST00000488171 BCL2L12Q9HB09 334 aa25.79■■□□□ 1.72
CD55-209ENST00000488171 ATP10DQ9P241 1426 aa25.79■■□□□ 1.72
CD55-209ENST00000488171 BTBD11A6QL63 1104 aa25.78■■□□□ 1.72
CD55-209ENST00000488171 EIF5P55010 431 aaKnown RBP25.78■■□□□ 1.72
CD55-209ENST00000488171 FMNL2Q96PY5 1086 aa25.78■■□□□ 1.72
CD55-209ENST00000488171 TEX13AQ9BXU3 409 aaPredicted RBP25.78■■□□□ 1.72
CD55-209ENST00000488171 BCS1LQ9Y276 419 aa25.78■■□□□ 1.72
CD55-209ENST00000488171 MCM10Q7L590 875 aa25.77■■□□□ 1.72
CD55-209ENST00000488171 NFIXQ14938 502 aa25.76■■□□□ 1.71
CD55-209ENST00000488171 AFDNP55196 1824 aaKnown RBP25.75■■□□□ 1.71
CD55-209ENST00000488171 RTF1Q92541 710 aaKnown RBP25.75■■□□□ 1.71
CD55-209ENST00000488171 NRXN2Q9P2S2 1712 aa25.75■■□□□ 1.71
CD55-209ENST00000488171 C1QTNF8P60827 252 aa25.74■■□□□ 1.71
CD55-209ENST00000488171 DCTN1Q14203 1278 aa25.74■■□□□ 1.71
CD55-209ENST00000488171 HTATSF1O43719 755 aaKnown RBP25.73■■□□□ 1.71
CD55-209ENST00000488171 GIGYF1O75420 1035 aaPredicted RBP25.73■■□□□ 1.71
CD55-209ENST00000488171 SCN7AQ01118 1682 aa25.72■■□□□ 1.71
CD55-209ENST00000488171 A0A087WZG4 1122 aa25.71■■□□□ 1.71
CD55-209ENST00000488171 A1BGP04217 495 aa25.71■■□□□ 1.71
CD55-209ENST00000488171 ARFGEF1Q9Y6D6 1849 aa25.71■■□□□ 1.71
CD55-209ENST00000488171 CHRNA5P30532 468 aa25.7■■□□□ 1.71
CD55-209ENST00000488171 IL6STP40189 918 aaPredicted RBP25.7■■□□□ 1.71
CD55-209ENST00000488171 PLEKHF1Q96S99 279 aa25.7■■□□□ 1.71
CD55-209ENST00000488171 PIM2Q9P1W9 311 aa25.7■■□□□ 1.71
CD55-209ENST00000488171 DLG5Q8TDM6 1919 aa25.7■■□□□ 1.7
CD55-209ENST00000488171 PRAMEF22A3QJZ6 481 aa25.69■■□□□ 1.7
CD55-209ENST00000488171 SERPINB2P05120 415 aa25.69■■□□□ 1.7
CD55-209ENST00000488171 USP16Q9Y5T5 823 aa25.69■■□□□ 1.7
CD55-209ENST00000488171 ARHGAP27Q6ZUM4 889 aa25.68■■□□□ 1.7
CD55-209ENST00000488171 TBC1D2BQ9UPU7 963 aa25.68■■□□□ 1.7
CD55-209ENST00000488171 ZNF330Q9Y3S2 320 aaPredicted RBP25.68■■□□□ 1.7
CD55-209ENST00000488171 DALRD3Q5D0E6 543 aaKnown RBP25.67■■□□□ 1.7
CD55-209ENST00000488171 GPBP1L1Q9HC44 474 aaPredicted RBP25.67■■□□□ 1.7
CD55-209ENST00000488171 SNRPA1P09661 255 aaKnown RBP25.66■■□□□ 1.7
CD55-209ENST00000488171 TAF7Q15545 349 aaPredicted RBP25.66■■□□□ 1.7
CD55-209ENST00000488171 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
CD55-209ENST00000488171 BICDL1Q6ZP65 573 aa25.66■■□□□ 1.7
CD55-209ENST00000488171 ZNF526Q8TF50 670 aaPredicted RBP25.66■■□□□ 1.7
CD55-209ENST00000488171 NEFMP07197 916 aa25.65■■□□□ 1.7
CD55-209ENST00000488171 DDX10Q13206 875 aaKnown RBP25.65■■□□□ 1.7
CD55-209ENST00000488171 RALBP1Q15311 655 aa25.65■■□□□ 1.7
CD55-209ENST00000488171 CARMIL3Q8ND23 1372 aa25.64■■□□□ 1.7
CD55-209ENST00000488171 PIP4K2AP48426 406 aaPredicted RBP25.64■■□□□ 1.69
CD55-209ENST00000488171 BCORQ6W2J9 1755 aa25.64■■□□□ 1.69
CD55-209ENST00000488171 DLEC1Q9Y238 1755 aa25.64■■□□□ 1.69
CD55-209ENST00000488171 CAMTA2O94983 1202 aa25.63■■□□□ 1.69
CD55-209ENST00000488171 NFE2L2Q16236 605 aa25.63■■□□□ 1.69
CD55-209ENST00000488171 MIS18AQ9NYP9 233 aa25.63■■□□□ 1.69
CD55-209ENST00000488171 KDM3BQ7LBC6 1761 aa25.62■■□□□ 1.69
CD55-209ENST00000488171 NPM2Q86SE8 214 aaKnown RBP25.6■■□□□ 1.69
CD55-209ENST00000488171 DZIP3Q86Y13 1208 aaKnown RBP25.6■■□□□ 1.69
CD55-209ENST00000488171 ANKRD31Q8N7Z5 1873 aa25.59■■□□□ 1.69
CD55-209ENST00000488171 PNNQ9H307 717 aaKnown RBP25.59■■□□□ 1.69
CD55-209ENST00000488171 LAMB4A4D0S4 1761 aa25.58■■□□□ 1.69
CD55-209ENST00000488171 SENP3-EIF4A1A0A087X0R7 540 aa25.58■■□□□ 1.69
CD55-209ENST00000488171 NBPF26B4DH59 902 aa25.58■■□□□ 1.69
CD55-209ENST00000488171 NBPF10Q6P3W6 841 aaKnown RBP25.58■■□□□ 1.69
CD55-209ENST00000488171 NBPF15Q8N660 670 aa25.58■■□□□ 1.69
CD55-209ENST00000488171 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
CD55-209ENST00000488171 MAPK8IP3Q9UPT6 1336 aa25.58■■□□□ 1.69
CD55-209ENST00000488171 C9orf131Q5VYM1 1079 aa25.56■■□□□ 1.68
CD55-209ENST00000488171 PRR5LQ6MZQ0 368 aa25.56■■□□□ 1.68
CD55-209ENST00000488171 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
CD55-209ENST00000488171 PNISRQ8TF01 805 aaKnown RBP25.56■■□□□ 1.68
CD55-209ENST00000488171 SETDB2Q96T68 719 aa25.56■■□□□ 1.68
CD55-209ENST00000488171 MYBBP1AQ9BQG0 1328 aaKnown RBP25.55■■□□□ 1.68
CD55-209ENST00000488171 CCDC24Q8N4L8 307 aa25.55■■□□□ 1.68
CD55-209ENST00000488171 H0YIN7 160 aa25.54■■□□□ 1.68
CD55-209ENST00000488171 KIF3CO14782 793 aa25.54■■□□□ 1.68
CD55-209ENST00000488171 COL11A2P13942 1736 aaPredicted RBP25.54■■□□□ 1.68
CD55-209ENST00000488171 TTLL6Q8N841 843 aa25.54■■□□□ 1.68
CD55-209ENST00000488171 BRIP1Q9BX63 1249 aa25.54■■□□□ 1.68
CD55-209ENST00000488171 SBF1O95248 1867 aa25.53■■□□□ 1.68
CD55-209ENST00000488171 EIF4A1P60842 406 aaKnown RBP25.53■■□□□ 1.68
CD55-209ENST00000488171 CLEC4GQ6UXB4 293 aa25.53■■□□□ 1.68
CD55-209ENST00000488171 PDE6BP35913 854 aa25.51■■□□□ 1.67
CD55-209ENST00000488171 CNBD1Q8NA66 436 aa25.51■■□□□ 1.67
CD55-209ENST00000488171 RNF181Q9P0P0 153 aa25.5■■□□□ 1.67
CD55-209ENST00000488171 PDZRN3Q9UPQ7 1066 aa25.5■■□□□ 1.67
CD55-209ENST00000488171 RIPK4P57078 832 aa25.49■■□□□ 1.67
CD55-209ENST00000488171 RASSF7Q02833 373 aa25.49■■□□□ 1.67
CD55-209ENST00000488171 ZNF652Q9Y2D9 606 aa25.49■■□□□ 1.67
CD55-209ENST00000488171 RGL2O15211 777 aa25.48■■□□□ 1.67
CD55-209ENST00000488171 TMPOP42166 694 aaKnown RBP25.47■■□□□ 1.67
CD55-209ENST00000488171 ST5P78524 1137 aa25.47■■□□□ 1.67
CD55-209ENST00000488171 ZNF622Q969S3 477 aaKnown RBP eCLIP25.47■■□□□ 1.673e-8■□□□□ 10.7
CD55-209ENST00000488171 NPHP1O15259 732 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms