RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 IL27Q8NEV9 243 aa6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 GJD4Q96KN9 370 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 PCMTD1Q96MG8 357 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 GOPCQ9HD26 462 aa6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 TPSG1Q9NRR2 321 aa6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 PCDHGC4Q9Y5F7 938 aa6.22□□□□□ -1.41
R3HDM1-219ENST00000488035 FAM182BQ5T319 152 aa6.21□□□□□ -1.42
R3HDM1-219ENST00000488035 TBC1D9Q6ZT07 1266 aa6.21□□□□□ -1.42
R3HDM1-219ENST00000488035 NLRP8Q86W28 1048 aa6.21□□□□□ -1.42
R3HDM1-219ENST00000488035 C1orf216Q8TAB5 229 aa6.21□□□□□ -1.42
R3HDM1-219ENST00000488035 SPDYE3A6NKU9 549 aa6.2□□□□□ -1.42
R3HDM1-219ENST00000488035 PPARGC1BQ86YN6 1023 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-219ENST00000488035 KLF15Q9UIH9 416 aa6.2□□□□□ -1.42
R3HDM1-219ENST00000488035 LRP8Q14114 963 aa6.19□□□□□ -1.42
R3HDM1-219ENST00000488035 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
R3HDM1-219ENST00000488035 ZCCHC2Q9C0B9 1178 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-219ENST00000488035 DNAAF2Q9NVR5 837 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-219ENST00000488035 APBB1O00213 710 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 ATXN7O15265 892 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 USP4Q13107 963 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 TLR1Q15399 786 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 PRSS36Q5K4E3 855 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 NBPF11Q86T75 865 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 HCN2Q9UL51 889 aa6.18□□□□□ -1.42
R3HDM1-219ENST00000488035 FCHSD1Q86WN1 690 aa6.17□□□□□ -1.42
R3HDM1-219ENST00000488035 CEP126Q9P2H0 1117 aa6.17□□□□□ -1.42
R3HDM1-219ENST00000488035 SOCS7O14512 581 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 H2AFB2P0C5Z0 115 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 PLA2G4AP47712 749 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 PRRT3Q5FWE3 981 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 SIRT1Q96EB6 747 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 MDFIQ99750 246 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 CDCA7Q9BWT1 371 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 NIFKQ9BYG3 293 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 NDUFB9Q9Y6M9 179 aa6.16□□□□□ -1.42
R3HDM1-219ENST00000488035 APBA3O96018 575 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 MAPTP10636 758 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 TNP2Q05952 138 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 CCDC85AQ96PX6 553 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 ETNK1Q9HBU6 452 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 PRR12Q9ULL5 1215 aa6.15□□□□□ -1.42
R3HDM1-219ENST00000488035 HYAL3O43820 417 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 ALAS2P22557 587 aa6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 NBPF1Q3BBV0 1214 aa6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 ZNF468Q5VIY5 522 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 BANK1Q8NDB2 785 aa6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 DOLKQ9UPQ8 538 aa6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 GTF3C3Q9Y5Q9 886 aa6.14□□□□□ -1.43
R3HDM1-219ENST00000488035 A0A1W2PNR3 127 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 DCDC2BA2VCK2 349 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 KHNYNO15037 678 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 TATP17735 454 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 CD33P20138 364 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 ATP4AP20648 1035 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 NACC1Q96RE7 527 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 PRDM6Q9NQX0 595 aa6.13□□□□□ -1.43
R3HDM1-219ENST00000488035 ELOA3CA0A087WX78 387 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 ELOA3DA6NLF2 546 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 FAM157BP0CG42 384 aa6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 COL9A3Q14050 684 aaPredicted RBP6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 ELOA3BQ3SY89 546 aa6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 ELOA3Q8NG57 546 aa6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 GJA3Q9Y6H8 435 aa6.12□□□□□ -1.43
R3HDM1-219ENST00000488035 INHAP05111 366 aa6.11□□□□□ -1.43
R3HDM1-219ENST00000488035 PCBP4P57723 403 aaKnown RBP6.11□□□□□ -1.43
R3HDM1-219ENST00000488035 EIF4G2P78344 907 aaKnown RBP eCLIP6.11□□□□□ -1.431e-6■■□□□ 14.4
R3HDM1-219ENST00000488035 SLFNL1Q499Z3 407 aa6.11□□□□□ -1.43
R3HDM1-219ENST00000488035 SAMD5Q5TGI4 173 aa6.1□□□□□ -1.43
R3HDM1-219ENST00000488035 ZDHHC3Q9NYG2 299 aa6.1□□□□□ -1.43
R3HDM1-219ENST00000488035 MARK1Q9P0L2 795 aa6.1□□□□□ -1.43
R3HDM1-219ENST00000488035 ARID1BQ8NFD5 2236 aaPredicted RBP6.1□□□□□ -1.43
R3HDM1-219ENST00000488035 GPR37L1O60883 481 aa6.09□□□□□ -1.43
R3HDM1-219ENST00000488035 SMTNP53814 917 aa6.09□□□□□ -1.43
R3HDM1-219ENST00000488035 GDF10P55107 478 aa6.09□□□□□ -1.43
R3HDM1-219ENST00000488035 MCTP1Q6DN14 999 aa6.09□□□□□ -1.43
R3HDM1-219ENST00000488035 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
R3HDM1-219ENST00000488035 CDK2AP1O14519 115 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 STAU1O95793 577 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 SCNN1DP51172 638 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 TRIM28Q13263 835 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 PHTF2Q8N3S3 785 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 MTMR14Q8NCE2 650 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 TIMELESSQ9UNS1 1208 aa6.08□□□□□ -1.44
R3HDM1-219ENST00000488035 SIN3BO75182 1162 aa6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 BICDL1Q6ZP65 573 aa6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 SYT9Q86SS6 491 aa6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 ZIC5Q96T25 663 aa6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 PRM3Q9NNZ6 103 aa6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 COL17A1Q9UMD9 1497 aaPredicted RBP6.07□□□□□ -1.44
R3HDM1-219ENST00000488035 ADARB2-AS1A8MUL3 147 aa6.06□□□□□ -1.44
R3HDM1-219ENST00000488035 EFSO43281 561 aa6.06□□□□□ -1.44
R3HDM1-219ENST00000488035 ADGRE1Q14246 886 aa6.06□□□□□ -1.44
R3HDM1-219ENST00000488035 MAP7D1Q3KQU3 841 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms