RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
TRA2B-214ENST00000487615 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
TRA2B-214ENST00000487615 KRT32Q14532 448 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 PRPF40BQ6NWY9 871 aaKnown RBP14.1□□□□□ -0.15
TRA2B-214ENST00000487615 KSR2Q6VAB6 950 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
TRA2B-214ENST00000487615 TTC39AQ5SRH9 613 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 A0A087WZG4 1122 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 FOSBP53539 338 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 TRIM29Q14134 588 aa14.1□□□□□ -0.15
TRA2B-214ENST00000487615 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
TRA2B-214ENST00000487615 USP6P35125 1406 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 ESYT1Q9BSJ8 1104 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 CNNM1Q9NRU3 951 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 NLRP1Q9C000 1473 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 PHAXQ9H814 394 aaKnown RBP14.09□□□□□ -0.15
TRA2B-214ENST00000487615 LARP1BQ659C4 914 aaKnown RBP14.09□□□□□ -0.15
TRA2B-214ENST00000487615 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 EVI5LQ96CN4 794 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 TSPY26PQ9H489 355 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 AKAP17AQ02040 695 aaKnown RBP14.09□□□□□ -0.15
TRA2B-214ENST00000487615 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC73Q6ZRK6 1079 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
TRA2B-214ENST00000487615 NRXN1Q9ULB1 1477 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 STK3Q13188 491 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 SLC39A6Q13433 755 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 GRM8O00222 908 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 HOXB7P09629 217 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 SASS6Q6UVJ0 657 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 LINS1Q8NG48 757 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 NEXMIFQ5QGS0 1516 aa14.08□□□□□ -0.16
TRA2B-214ENST00000487615 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 BAG4O95429 457 aaKnown RBP14.07□□□□□ -0.16
TRA2B-214ENST00000487615 STARD3NLO95772 234 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 KRT85P78386 507 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 OTUD7AQ8TE49 926 aaPredicted RBP14.07□□□□□ -0.16
TRA2B-214ENST00000487615 ORAI2Q96SN7 254 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 VWDEQ8N2E2 1590 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 DEPDC5O75140 1603 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 RNMTO43148 476 aaKnown RBP14.07□□□□□ -0.16
TRA2B-214ENST00000487615 PDIA4P13667 645 aaKnown RBP14.07□□□□□ -0.16
TRA2B-214ENST00000487615 ANAPC15P60006 121 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 FKBP4Q02790 459 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRA2B-214ENST00000487615 LIMCH1Q9UPQ0 1083 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 MED14O60244 1454 aa14.07□□□□□ -0.16
TRA2B-214ENST00000487615 XAGE3Q8WTP9 111 aa14.06□□□□□ -0.16
TRA2B-214ENST00000487615 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.06□□□□□ -0.165e-7■□□□□ 10.3
TRA2B-214ENST00000487615 COPS6Q7L5N1 327 aa14.06□□□□□ -0.16
TRA2B-214ENST00000487615 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
TRA2B-214ENST00000487615 SH2B1Q9NRF2 756 aaPredicted RBP14.06□□□□□ -0.16
TRA2B-214ENST00000487615 USP26Q9BXU7 913 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 ERICH2A1L162 156 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 TMX3Q96JJ7 454 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 DHX16O60231 1041 aaKnown RBP14.05□□□□□ -0.16
TRA2B-214ENST00000487615 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 USP19O94966 1318 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
TRA2B-214ENST00000487615 LGR6Q9HBX8 967 aa14.05□□□□□ -0.16
TRA2B-214ENST00000487615 CCDC39Q9UFE4 941 aa14.04□□□□□ -0.16
TRA2B-214ENST00000487615 PNPLA6Q8IY17 1366 aa14.04□□□□□ -0.16
TRA2B-214ENST00000487615 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
TRA2B-214ENST00000487615 PTPRMP28827 1452 aa14.04□□□□□ -0.16
TRA2B-214ENST00000487615 CWF19L2Q2TBE0 894 aaKnown RBP14.04□□□□□ -0.16
TRA2B-214ENST00000487615 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
TRA2B-214ENST00000487615 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
TRA2B-214ENST00000487615 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
TRA2B-214ENST00000487615 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRA2B-214ENST00000487615 AKAP2Q9Y2D5 859 aa14.03□□□□□ -0.16
TRA2B-214ENST00000487615 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 TTC41PQ6P2S7 1318 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 ADGRB1O14514 1584 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 IFIT1P09914 478 aaKnown RBP14.02□□□□□ -0.16
TRA2B-214ENST00000487615 CHMLP26374 656 aa14.02□□□□□ -0.16
TRA2B-214ENST00000487615 CWC25Q9NXE8 425 aaPredicted RBP14.02□□□□□ -0.16
TRA2B-214ENST00000487615 PA2G4Q9UQ80 394 aaKnown RBP14.02□□□□□ -0.16
TRA2B-214ENST00000487615 SYCE3A1L190 88 aa14.02□□□□□ -0.17
TRA2B-214ENST00000487615 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
TRA2B-214ENST00000487615 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRA2B-214ENST00000487615 MPHOSPH8Q99549 860 aa14.02□□□□□ -0.17
TRA2B-214ENST00000487615 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.17
TRA2B-214ENST00000487615 PNMA6EA0A0J9YXQ4 647 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms