RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 C1orf141Q5JVX7 400 aa10.58□□□□□ -0.72
PDPN-205ENST00000487038 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
PDPN-205ENST00000487038 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
PDPN-205ENST00000487038 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
PDPN-205ENST00000487038 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
PDPN-205ENST00000487038 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
PDPN-205ENST00000487038 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
PDPN-205ENST00000487038 SLC34A2O95436 690 aa10.56□□□□□ -0.72
PDPN-205ENST00000487038 TM4SF1P30408 202 aa10.56□□□□□ -0.72
PDPN-205ENST00000487038 MTHFSP49914 203 aa10.56□□□□□ -0.72
PDPN-205ENST00000487038 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
PDPN-205ENST00000487038 TTLL6Q8N841 843 aa10.56□□□□□ -0.72
PDPN-205ENST00000487038 PRDM10Q9NQV6 1147 aa10.56□□□□□ -0.72
PDPN-205ENST00000487038 COL15A1P39059 1388 aa10.55□□□□□ -0.72
PDPN-205ENST00000487038 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
PDPN-205ENST00000487038 POLKQ9UBT6 870 aa10.55□□□□□ -0.72
PDPN-205ENST00000487038 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
PDPN-205ENST00000487038 CNTNAP1P78357 1384 aa10.54□□□□□ -0.72
PDPN-205ENST00000487038 H0YIN7 160 aa10.54□□□□□ -0.72
PDPN-205ENST00000487038 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
PDPN-205ENST00000487038 CARD14Q9BXL6 1004 aa10.54□□□□□ -0.72
PDPN-205ENST00000487038 MRC1P22897 1456 aa10.54□□□□□ -0.72
PDPN-205ENST00000487038 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 NFKBIEO00221 500 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
PDPN-205ENST00000487038 C2CD5Q86YS7 1000 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 NARFQ9UHQ1 456 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
PDPN-205ENST00000487038 SOS1Q07889 1333 aaPredicted RBP10.53□□□□□ -0.72
PDPN-205ENST00000487038 FOXN1O15353 648 aa10.52□□□□□ -0.73
PDPN-205ENST00000487038 SERPINB2P05120 415 aa10.52□□□□□ -0.73
PDPN-205ENST00000487038 NFIXQ14938 502 aa10.52□□□□□ -0.73
PDPN-205ENST00000487038 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
PDPN-205ENST00000487038 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
PDPN-205ENST00000487038 IQCA1LA6NCM1 817 aa10.51□□□□□ -0.73
PDPN-205ENST00000487038 TNNT2P45379 298 aaPredicted RBP10.51□□□□□ -0.73
PDPN-205ENST00000487038 CARMIL3Q8ND23 1372 aa10.51□□□□□ -0.73
PDPN-205ENST00000487038 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
PDPN-205ENST00000487038 ADAMTSL1Q8N6G6 1762 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 SLX4Q8IY92 1834 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 POTECB2RU33 542 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 PDE6BP35913 854 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 LDHDQ86WU2 507 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 TAOK3Q9H2K8 898 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 LTBP3Q9NS15 1303 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 PDE4DIPQ5VU43 2346 aa10.5□□□□□ -0.73
PDPN-205ENST00000487038 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
PDPN-205ENST00000487038 SOGA3Q5TF21 947 aa10.49□□□□□ -0.73
PDPN-205ENST00000487038 ZNF622Q969S3 477 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDPN-205ENST00000487038 TRPM7Q96QT4 1865 aa10.49□□□□□ -0.73
PDPN-205ENST00000487038 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
PDPN-205ENST00000487038 A0A087WZG4 1122 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 NPHP1O15259 732 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 C21orf2O43822 256 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
PDPN-205ENST00000487038 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 SLC52A2Q9HAB3 445 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 PCDH10Q9P2E7 1040 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 ZBTB1Q9Y2K1 713 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 PASKQ96RG2 1323 aa10.48□□□□□ -0.73
PDPN-205ENST00000487038 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
PDPN-205ENST00000487038 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
PDPN-205ENST00000487038 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
PDPN-205ENST00000487038 BRIP1Q9BX63 1249 aa10.47□□□□□ -0.73
PDPN-205ENST00000487038 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
PDPN-205ENST00000487038 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 VEGFBP49765 207 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 LBX1P52954 281 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
PDPN-205ENST00000487038 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 BICDL1Q6ZP65 573 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 NPM2Q86SE8 214 aaKnown RBP10.46□□□□□ -0.73
PDPN-205ENST00000487038 AEBP1Q8IUX7 1158 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 ABHD8Q96I13 439 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
PDPN-205ENST00000487038 STARD3NLO95772 234 aa10.45□□□□□ -0.74
PDPN-205ENST00000487038 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
PDPN-205ENST00000487038 ST5P78524 1137 aa10.45□□□□□ -0.74
PDPN-205ENST00000487038 MLLT1Q03111 559 aaPredicted RBP10.45□□□□□ -0.74
PDPN-205ENST00000487038 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
PDPN-205ENST00000487038 L3MBTL3Q96JM7 780 aaPredicted RBP10.45□□□□□ -0.74
PDPN-205ENST00000487038 POLR3GLQ9BT43 218 aa10.45□□□□□ -0.74
PDPN-205ENST00000487038 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
PDPN-205ENST00000487038 DEFB115Q30KQ5 88 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
PDPN-205ENST00000487038 STYK1Q6J9G0 422 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 PRR5LQ6MZQ0 368 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 PNMA8AQ86V59 439 aaPredicted RBP10.44□□□□□ -0.74
PDPN-205ENST00000487038 CNBD1Q8NA66 436 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
PDPN-205ENST00000487038 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
PDPN-205ENST00000487038 RASSF10A6NK89 507 aa10.43□□□□□ -0.74
PDPN-205ENST00000487038 HSPA8P11142 646 aaKnown RBP10.43□□□□□ -0.74
PDPN-205ENST00000487038 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
PDPN-205ENST00000487038 CCDC93Q567U6 631 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms