RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 NARFQ9UHQ1 456 aa27.21■■□□□ 1.95
PHF1-208ENST00000486845 COL15A1P39059 1388 aa27.21■■□□□ 1.95
PHF1-208ENST00000486845 HMOX1P09601 288 aa27.2■■□□□ 1.94
PHF1-208ENST00000486845 SLC39A6Q13433 755 aa27.2■■□□□ 1.94
PHF1-208ENST00000486845 WDR90Q96KV7 1748 aa27.2■■□□□ 1.94
PHF1-208ENST00000486845 SBF1O95248 1867 aa27.19■■□□□ 1.94
PHF1-208ENST00000486845 FSTL1Q12841 308 aa27.19■■□□□ 1.94
PHF1-208ENST00000486845 AFDNP55196 1824 aaKnown RBP27.18■■□□□ 1.94
PHF1-208ENST00000486845 TNRC6CQ9HCJ0 1690 aaKnown RBP27.18■■□□□ 1.94
PHF1-208ENST00000486845 NFIXQ14938 502 aa27.18■■□□□ 1.94
PHF1-208ENST00000486845 VSIG10Q8N0Z9 540 aa27.18■■□□□ 1.94
PHF1-208ENST00000486845 NRXN2Q9P2S2 1712 aa27.18■■□□□ 1.94
PHF1-208ENST00000486845 ZBTB1Q9Y2K1 713 aa27.17■■□□□ 1.94
PHF1-208ENST00000486845 MTHFSDQ2M296 383 aaKnown RBP27.16■■□□□ 1.94
PHF1-208ENST00000486845 ZC3H4Q9UPT8 1303 aaKnown RBP27.16■■□□□ 1.94
PHF1-208ENST00000486845 CCER1Q8TC90 406 aaPredicted RBP27.15■■□□□ 1.94
PHF1-208ENST00000486845 KIF7Q2M1P5 1343 aa27.15■■□□□ 1.94
PHF1-208ENST00000486845 UBR2Q8IWV8 1755 aa27.14■■□□□ 1.94
PHF1-208ENST00000486845 DLEC1Q9Y238 1755 aa27.14■■□□□ 1.94
PHF1-208ENST00000486845 DIAPH1O60610 1272 aaKnown RBP27.14■■□□□ 1.94
PHF1-208ENST00000486845 RRAGCQ9HB90 399 aa27.14■■□□□ 1.94
PHF1-208ENST00000486845 SERPINB2P05120 415 aa27.13■■□□□ 1.93
PHF1-208ENST00000486845 BCL2L12Q9HB09 334 aa27.13■■□□□ 1.93
PHF1-208ENST00000486845 RASSF7Q02833 373 aa27.12■■□□□ 1.93
PHF1-208ENST00000486845 TTC5Q8N0Z6 440 aa27.11■■□□□ 1.93
PHF1-208ENST00000486845 STARD3NLO95772 234 aa27.1■■□□□ 1.93
PHF1-208ENST00000486845 LMNB1P20700 586 aa27.1■■□□□ 1.93
PHF1-208ENST00000486845 CANXP27824 592 aaKnown RBP27.1■■□□□ 1.93
PHF1-208ENST00000486845 TTLL6Q8N841 843 aa27.1■■□□□ 1.93
PHF1-208ENST00000486845 A0A087WZG4 1122 aa27.09■■□□□ 1.93
PHF1-208ENST00000486845 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
PHF1-208ENST00000486845 KLRG1Q96E93 195 aa27.09■■□□□ 1.93
PHF1-208ENST00000486845 SMC1BQ8NDV3 1235 aa27.08■■□□□ 1.93
PHF1-208ENST00000486845 H0YIN7 160 aa27.07■■□□□ 1.92
PHF1-208ENST00000486845 PER1O15534 1290 aaPredicted RBP27.07■■□□□ 1.92
PHF1-208ENST00000486845 HTRA3P83110 453 aa27.07■■□□□ 1.92
PHF1-208ENST00000486845 CC2D1BQ5T0F9 858 aaKnown RBP27.07■■□□□ 1.92
PHF1-208ENST00000486845 EIF5P55010 431 aaKnown RBP27.06■■□□□ 1.92
PHF1-208ENST00000486845 CARMIL3Q8ND23 1372 aa27.06■■□□□ 1.92
PHF1-208ENST00000486845 TEFQ10587 303 aa27.05■■□□□ 1.92
PHF1-208ENST00000486845 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
PHF1-208ENST00000486845 BICDL1Q6ZP65 573 aa27.04■■□□□ 1.92
PHF1-208ENST00000486845 JMYQ8N9B5 988 aa27.04■■□□□ 1.92
PHF1-208ENST00000486845 TEX13AQ9BXU3 409 aaPredicted RBP27.04■■□□□ 1.92
PHF1-208ENST00000486845 COL3A1P02461 1466 aaPredicted RBP27.04■■□□□ 1.92
PHF1-208ENST00000486845 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
PHF1-208ENST00000486845 SCN7AQ01118 1682 aa27.03■■□□□ 1.92
PHF1-208ENST00000486845 GAS2L2Q8NHY3 880 aa27.03■■□□□ 1.92
PHF1-208ENST00000486845 HEG1Q9ULI3 1381 aa27.03■■□□□ 1.92
PHF1-208ENST00000486845 GNAT3A8MTJ3 354 aa27.02■■□□□ 1.92
PHF1-208ENST00000486845 VEGFAP15692 232 aaPredicted RBP27.02■■□□□ 1.92
PHF1-208ENST00000486845 PRELPP51888 382 aa27.02■■□□□ 1.92
PHF1-208ENST00000486845 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
PHF1-208ENST00000486845 ZNF496Q96IT1 587 aaPredicted RBP27.02■■□□□ 1.92
PHF1-208ENST00000486845 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
PHF1-208ENST00000486845 NPC1L1Q9UHC9 1359 aa27.01■■□□□ 1.91
PHF1-208ENST00000486845 U2SURPO15042 1029 aaKnown RBP27.01■■□□□ 1.91
PHF1-208ENST00000486845 SIPA1L3O60292 1781 aaPredicted RBP27.01■■□□□ 1.91
PHF1-208ENST00000486845 CCDC88AQ3V6T2 1871 aa27■■□□□ 1.91
PHF1-208ENST00000486845 NFKBIEO00221 500 aa27■■□□□ 1.91
PHF1-208ENST00000486845 TBC1D9BQ66K14 1250 aa27■■□□□ 1.91
PHF1-208ENST00000486845 IL17REQ8NFR9 667 aa27■■□□□ 1.91
PHF1-208ENST00000486845 ANKRD31Q8N7Z5 1873 aa27■■□□□ 1.91
PHF1-208ENST00000486845 PDE6BP35913 854 aa26.99■■□□□ 1.91
PHF1-208ENST00000486845 BRIP1Q9BX63 1249 aa26.99■■□□□ 1.91
PHF1-208ENST00000486845 IL6STP40189 918 aaPredicted RBP26.98■■□□□ 1.91
PHF1-208ENST00000486845 ZNF330Q9Y3S2 320 aaPredicted RBP26.98■■□□□ 1.91
PHF1-208ENST00000486845 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.911e-7■■■□□ 16
PHF1-208ENST00000486845 FMNL2Q96PY5 1086 aa26.97■■□□□ 1.91
PHF1-208ENST00000486845 PRR5LQ6MZQ0 368 aa26.96■■□□□ 1.91
PHF1-208ENST00000486845 NPM2Q86SE8 214 aaKnown RBP26.96■■□□□ 1.91
PHF1-208ENST00000486845 TBC1D2BQ9UPU7 963 aa26.96■■□□□ 1.91
PHF1-208ENST00000486845 COL11A2P13942 1736 aaPredicted RBP26.95■■□□□ 1.9
PHF1-208ENST00000486845 DPY19L2Q6NUT2 758 aa26.94■■□□□ 1.9
PHF1-208ENST00000486845 CEMIPQ8WUJ3 1361 aa26.94■■□□□ 1.9
PHF1-208ENST00000486845 C21orf2O43822 256 aa26.93■■□□□ 1.9
PHF1-208ENST00000486845 FER1L6Q2WGJ9 1857 aa26.92■■□□□ 1.9
PHF1-208ENST00000486845 CNBD1Q8NA66 436 aa26.92■■□□□ 1.9
PHF1-208ENST00000486845 SETDB2Q96T68 719 aa26.92■■□□□ 1.9
PHF1-208ENST00000486845 DICER1Q9UPY3 1922 aaKnown RBP26.92■■□□□ 1.9
PHF1-208ENST00000486845 NPHP1O15259 732 aa26.91■■□□□ 1.9
PHF1-208ENST00000486845 CAMTA2O94983 1202 aa26.91■■□□□ 1.9
PHF1-208ENST00000486845 A1BGP04217 495 aa26.91■■□□□ 1.9
PHF1-208ENST00000486845 CNGB1Q14028 1251 aaPredicted RBP26.91■■□□□ 1.9
PHF1-208ENST00000486845 CCDC24Q8N4L8 307 aa26.91■■□□□ 1.9
PHF1-208ENST00000486845 ZNF219Q9P2Y4 722 aaPredicted RBP26.91■■□□□ 1.9
PHF1-208ENST00000486845 BCORQ6W2J9 1755 aa26.9■■□□□ 1.9
PHF1-208ENST00000486845 ERFEQ4G0M1 354 aa26.9■■□□□ 1.9
PHF1-208ENST00000486845 LTBP3Q9NS15 1303 aa26.9■■□□□ 1.9
PHF1-208ENST00000486845 BTBD11A6QL63 1104 aa26.89■■□□□ 1.9
PHF1-208ENST00000486845 ST5P78524 1137 aa26.89■■□□□ 1.9
PHF1-208ENST00000486845 COL13A1Q5TAT6 717 aaPredicted RBP26.89■■□□□ 1.9
PHF1-208ENST00000486845 CNKSR1Q969H4 720 aa26.89■■□□□ 1.9
PHF1-208ENST00000486845 POTECB2RU33 542 aa26.88■■□□□ 1.89
PHF1-208ENST00000486845 STYK1Q6J9G0 422 aa26.88■■□□□ 1.89
PHF1-208ENST00000486845 CFAP53Q96M91 514 aa26.88■■□□□ 1.89
PHF1-208ENST00000486845 TAOK3Q9H2K8 898 aa26.88■■□□□ 1.89
PHF1-208ENST00000486845 PRKAR2BP31323 418 aa26.87■■□□□ 1.89
PHF1-208ENST00000486845 SOGA3Q5TF21 947 aa26.87■■□□□ 1.89
PHF1-208ENST00000486845 DZIP3Q86Y13 1208 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms