RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 NFIXQ14938 502 aa19.53■□□□□ 0.72
SDCCAG3-211ENST00000486441 FSTL1Q12841 308 aa19.52■□□□□ 0.72
SDCCAG3-211ENST00000486441 JMYQ8N9B5 988 aa19.52■□□□□ 0.72
SDCCAG3-211ENST00000486441 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
SDCCAG3-211ENST00000486441 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
SDCCAG3-211ENST00000486441 ZBTB1Q9Y2K1 713 aa19.51■□□□□ 0.71
SDCCAG3-211ENST00000486441 MRC1P22897 1456 aa19.5■□□□□ 0.71
SDCCAG3-211ENST00000486441 RASSF7Q02833 373 aa19.5■□□□□ 0.71
SDCCAG3-211ENST00000486441 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
SDCCAG3-211ENST00000486441 ZPR1O75312 459 aa19.49■□□□□ 0.71
SDCCAG3-211ENST00000486441 MTHFSDQ2M296 383 aaKnown RBP19.49■□□□□ 0.71
SDCCAG3-211ENST00000486441 KDM2BQ8NHM5 1336 aa19.49■□□□□ 0.71
SDCCAG3-211ENST00000486441 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
SDCCAG3-211ENST00000486441 NRXN2Q9P2S2 1712 aa19.48■□□□□ 0.71
SDCCAG3-211ENST00000486441 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
SDCCAG3-211ENST00000486441 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
SDCCAG3-211ENST00000486441 SERPINB2P05120 415 aa19.47■□□□□ 0.71
SDCCAG3-211ENST00000486441 HMOX1P09601 288 aa19.47■□□□□ 0.71
SDCCAG3-211ENST00000486441 COL15A1P39059 1388 aa19.46■□□□□ 0.71
SDCCAG3-211ENST00000486441 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
SDCCAG3-211ENST00000486441 PER1O15534 1290 aaPredicted RBP19.46■□□□□ 0.71
SDCCAG3-211ENST00000486441 COL13A1Q5TAT6 717 aaPredicted RBP19.46■□□□□ 0.71
SDCCAG3-211ENST00000486441 POTECB2RU33 542 aa19.45■□□□□ 0.7
SDCCAG3-211ENST00000486441 NFKBIEO00221 500 aa19.45■□□□□ 0.7
SDCCAG3-211ENST00000486441 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
SDCCAG3-211ENST00000486441 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
SDCCAG3-211ENST00000486441 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
SDCCAG3-211ENST00000486441 LMNB1P20700 586 aa19.44■□□□□ 0.7
SDCCAG3-211ENST00000486441 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
SDCCAG3-211ENST00000486441 ZC3H4Q9UPT8 1303 aaKnown RBP19.43■□□□□ 0.7
SDCCAG3-211ENST00000486441 TTLL6Q8N841 843 aa19.42■□□□□ 0.7
SDCCAG3-211ENST00000486441 CANXP27824 592 aaKnown RBP19.41■□□□□ 0.7
SDCCAG3-211ENST00000486441 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
SDCCAG3-211ENST00000486441 SMC1BQ8NDV3 1235 aa19.41■□□□□ 0.7
SDCCAG3-211ENST00000486441 IL17REQ8NFR9 667 aa19.41■□□□□ 0.7
SDCCAG3-211ENST00000486441 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
SDCCAG3-211ENST00000486441 DLEC1Q9Y238 1755 aa19.4■□□□□ 0.7
SDCCAG3-211ENST00000486441 VIRMAQ69YN4 1812 aaKnown RBP19.4■□□□□ 0.7
SDCCAG3-211ENST00000486441 ZNF496Q96IT1 587 aaPredicted RBP19.4■□□□□ 0.7
SDCCAG3-211ENST00000486441 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
SDCCAG3-211ENST00000486441 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.7
SDCCAG3-211ENST00000486441 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
SDCCAG3-211ENST00000486441 TBC1D9BQ66K14 1250 aa19.39■□□□□ 0.69
SDCCAG3-211ENST00000486441 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
SDCCAG3-211ENST00000486441 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
SDCCAG3-211ENST00000486441 H0YIN7 160 aa19.37■□□□□ 0.69
SDCCAG3-211ENST00000486441 CCDC24Q8N4L8 307 aa19.37■□□□□ 0.69
SDCCAG3-211ENST00000486441 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
SDCCAG3-211ENST00000486441 ANKRD31Q8N7Z5 1873 aa19.37■□□□□ 0.69
SDCCAG3-211ENST00000486441 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
SDCCAG3-211ENST00000486441 COL3A1P02461 1466 aaPredicted RBP19.35■□□□□ 0.69
SDCCAG3-211ENST00000486441 STARD3NLO95772 234 aa19.35■□□□□ 0.69
SDCCAG3-211ENST00000486441 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
SDCCAG3-211ENST00000486441 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
SDCCAG3-211ENST00000486441 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
SDCCAG3-211ENST00000486441 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
SDCCAG3-211ENST00000486441 KCNQ3O43525 872 aa19.34■□□□□ 0.69
SDCCAG3-211ENST00000486441 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
SDCCAG3-211ENST00000486441 A0A087WZG4 1122 aa19.33■□□□□ 0.68
SDCCAG3-211ENST00000486441 C21orf2O43822 256 aa19.33■□□□□ 0.68
SDCCAG3-211ENST00000486441 A1BGP04217 495 aa19.33■□□□□ 0.68
SDCCAG3-211ENST00000486441 CAMTA2O94983 1202 aa19.32■□□□□ 0.68
SDCCAG3-211ENST00000486441 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
SDCCAG3-211ENST00000486441 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 ZNF622Q969S3 477 aaKnown RBP eCLIP19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 PHACTR3Q96KR7 559 aa19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
SDCCAG3-211ENST00000486441 GNAT3A8MTJ3 354 aa19.3■□□□□ 0.68
SDCCAG3-211ENST00000486441 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
SDCCAG3-211ENST00000486441 POTEJP0CG39 1038 aa19.3■□□□□ 0.68
SDCCAG3-211ENST00000486441 TEX13AQ9BXU3 409 aaPredicted RBP19.3■□□□□ 0.68
SDCCAG3-211ENST00000486441 COL11A2P13942 1736 aaPredicted RBP19.3■□□□□ 0.68
SDCCAG3-211ENST00000486441 SIPA1L3O60292 1781 aaPredicted RBP19.29■□□□□ 0.68
SDCCAG3-211ENST00000486441 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
SDCCAG3-211ENST00000486441 PDE6BP35913 854 aa19.29■□□□□ 0.68
SDCCAG3-211ENST00000486441 C7orf43Q8WVR3 580 aa19.29■□□□□ 0.68
SDCCAG3-211ENST00000486441 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
SDCCAG3-211ENST00000486441 LTBP3Q9NS15 1303 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 SLX4Q8IY92 1834 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 DICER1Q9UPY3 1922 aaKnown RBP19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 SRGNP10124 158 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 USP16Q9Y5T5 823 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
SDCCAG3-211ENST00000486441 SCN7AQ01118 1682 aa19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 PRAMEF22A3QJZ6 481 aa19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 DDNO94850 711 aaPredicted RBP19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 TEFQ10587 303 aa19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 TNS4Q8IZW8 715 aa19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
SDCCAG3-211ENST00000486441 DPY19L2Q6NUT2 758 aa19.26■□□□□ 0.67
SDCCAG3-211ENST00000486441 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
SDCCAG3-211ENST00000486441 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
SDCCAG3-211ENST00000486441 PIP4K2AP48426 406 aaPredicted RBP19.25■□□□□ 0.67
SDCCAG3-211ENST00000486441 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
SDCCAG3-211ENST00000486441 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms